Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00036 ATGTCATCAACCACCGCCACTACCACCTTCTCTTGCGGCGACTCACCCAACCACCTTGACACGCCGACACTAGACAGGGAGTTCCCCAATCTCCTGCAGTCGATTTCCGAGCACGGCGGATATGCTTACGTTAGTATGGCGGCTCTGGCCGCCGCGGGGGACTTTCGCGCGGCTGAAGCAGCTCGTGAGATGGCGTGGGAGCAGCTACACTCGGGGCCCTGGCACTCCGTCCTTCCACTATGGCGCGATGCTTATTCGATGTCATGCCTCCACGTTGCGAAATATCATTATAGTATTGGTGAATTCAAGGAGGCTCTTAGGGTTTTGGATATGGGACTGATCATGGGAGGGGTTCTTCTGCGGAAGGACTTGGACTCTGCAGTCGATAAAGTATCGGGGAAGGTCAAGGACGTTAGGGTTTCCGAAGAAAGCCATGAACGTTTCGAGAAGTCCGAGCATCGATTTGTTGATCGGGAACTTAATGAAGCTGAGGTTCGCCAAATTTTACCTGCGAAGTCTCTTTCTTCTAAGATTGTGGTGAAGAGGTCCAATCTGTCACTGGAAACGTTCCTAAAAAATTATTATCTGTCTGGTTCCCCTGTTATTATCAGTGATTGTATGGCTCACTGGCCAGCCAAGACAAAATGGAATAGCAGGGGTTACTTGAAGAGGGTTGCCGGTTACCGCACTGTGCCGGTTGAGGTTGGGAAGAACTATTTATCTGCTGAATGGAAGCAAGAGTTAATTACATTTACAGAGTTTCTTCAGCGGATAGAGTCCCACTGTTCTTCTGGTGGTCCGACGTATCTCGCTCAGCATCCATTATTTGATCAGATTTATGAGCTACGGAAAGACATTTGTATTCCTGACTATTGTTTTGCTGGTGGAGGGGAGCTAAGATCTCTCAATGCTTGGTTTGGTCCCGCTGGGACAGTAACACCATTACACCATGATCCACACCATAACATACTCGCTCAGGTTGTCGGGAAGAAGTATATAAGGCTTTATTCTGCATCTCTATCTGAGGAACTTTATCCTTACGCTGAAACCATGCTTAGCAATTCCAGCCAGGTTGATCTAGATGACATTGATGAGAGGAAGTTTCCTAAAGTGCAAGAGTTGGAGTTTGTAGACTGTATCTTAGAGGAAGGTGAAATGCTATATATCCCACCTAAATGGTGGCACTACGTACGTTCTCTAACTACAAGTTTCTCGGTTAGCTTTTGGTGGAGCAAAGGTGAAGAAAATTCATCTGCATCCTAA 1263 0.4735 MSSTTATTTFSCGDSPNHLDTPTLDREFPNLLQSISEHGGYAYVSMAALAAAGDFRAAEAAREMAWEQLHSGPWHSVLPLWRDAYSMSCLHVAKYHYSIGEFKEALRVLDMGLIMGGVLLRKDLDSAVDKVSGKVKDVRVSEESHERFEKSEHRFVDRELNEAEVRQILPAKSLSSKIVVKRSNLSLETFLKNYYLSGSPVIISDCMAHWPAKTKWNSRGYLKRVAGYRTVPVEVGKNYLSAEWKQELITFTEFLQRIESHCSSGGPTYLAQHPLFDQIYELRKDICIPDYCFAGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYSASLSEELYPYAETMLSNSSQVDLDDIDERKFPKVQELEFVDCILEEGEMLYIPPKWWHYVRSLTTSFSVSFWWSKGEENSSAS 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00036 420 FunFam lysine-specific demethylase JMJ30 178 410 - -
Bach9g00036 420 Pfam Cupin-like domain 189 412 IPR041667 -
Bach9g00036 420 SMART cupin_9 253 419 IPR003347 -
Bach9g00036 420 Gene3D Cupin 178 411 - -
Bach9g00036 420 SUPERFAMILY Clavaminate synthase-like 183 411 - -
Bach9g00036 420 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 84 415 - -
Bach9g00036 420 ProSiteProfiles JmjC domain profile. 262 420 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00036 Bach-Chr9 268285 272093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00036 164 410 Acyl Lipid Metabolism Gene Families AT3G45880 25.510 2.68e-14 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bach9g00036 Cupin_8 1.7e-47 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00036 K24444 - qsa:O6P43_000107 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g00036 9 268285 272093 Bach9g00036 9 268285 272093 ECH