Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bach9g00013 | ATGCCTAAGCAAATCCATGAGATTAAAGACTTCCTTCTCACAGCCCGGAGGAAGGATGCACGTTCTGTGAAAATCAAAAGAAGCAAAGATGTGGTGAAGTTCAAAGTCCGTTGCTCCAAGTATCTCTACACCCTTTGTGTGTTTGATTCTGAGAAAGCTGATAAGTTGAAGCAATCACTTCCTCCAGGTTTGAGCGTACAAGATCTGTGA | 210 | 0.4286 | MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL | 69 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bach9g00013 | 69 | Pfam | Ribosomal L38e protein family | 2 | 68 | IPR002675 | GO:0003735|GO:0005840|GO:0006412 | |
| Bach9g00013 | 69 | PANTHER | 60S RIBOSOMAL PROTEIN L38 | 1 | 68 | IPR002675 | GO:0003735|GO:0005840|GO:0006412 | |
| Bach9g00013 | 69 | FunFam | 60S ribosomal protein L38 | 1 | 69 | - | - | |
| Bach9g00013 | 69 | Gene3D | - | 1 | 69 | IPR038464 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bach9g00013 | Bach-Chr9 | 109706 | 110967 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bach9g00013 | 1 | 69 | Cytoplasmic Ribosomal Protein Gene Family | AT3G59540 | 95.652 | 2.09e-44 | 135 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bach9g00013 | K02923 | - | cpap:110813764 | 139.428 |