Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00009 GGTCTTTTCACACCATCTTTGGCCATTTCTGGTGCAACCATTTGGCTTATCTGCTAAAAAGGCTTGAGAAAATTTTTCCGAAAACTTTTGGTGTTTGGTAGGGTCGGCGTCACTGGCTGTTGAGCAAATTGAGTGAATTTTGGTGTTTTCAAAATCCTAAAATTTGAAAAGGAAGAGAAGGTGAATATTAGGGTTTGAAGCAGCGAGAAAGAAGAATATGAAAATTCAGTGCGATGTATGTGAGAAAGCGCCGGCAACGGTGATTTGTTGCGCCGATGAGGCAGCTCTATGTGCCAAATGCGACGTTGAAGTTCATGCCGCCAACAAACTTGCAAGCAAGCACCAGAGGCTTCTCCTTCAATGCCTATCAAACAAGCTTCCCAGATGTGACATATGCCAGGATAAGGCTGCTTTCATATTCTGTGTTGAAGACAGAGCACTGTTGTGTCAAGACTGTGATGAACCAATTCATTCAGCTGGTAGCCTTTCTGCCAACCACCAGCGCTTTCTGGCCACAGGTATTCGTGTGCCATTGAGTTCTAATTGTACCAAAGAGAATGATAAAAGTCGGTTGGAGCCATCTAATAGAAATGCACAACAAATTGCTCCCAAACTTCCTTCTCACCAAGTGCCTAGCTTCTCATCGTCTTGGGCTGTTGATGACTTGTTGGAATTAACAGACTTTGAATCACCTGATAAGAAGGAATTCCTTGAGTTTGGAGAGCTAGAATGGTTGGGAGACATGGGTCTTTTTGGTGAACAATTTGCTCAGGATGCCTTGGCTGCTGCTGAAGTTCCTGAGCTTCCAGTGACACAAACCAGTAATGTTGCCTCGTATAGATCCTCTAAGTCCTATAATGCTTACAAGAAGCCGAGGCTCGAAGTCCTAGATGAAGAAGATGACGACGAGCATTTCACTGTGCCTGATCTTGGCTGAAGCAACTTACCCTTAAATATCTCTAGGATGATGAGTTGAGTTGTATATTCATACCTCTCTAAGGATAATCATATCAAATATGTACACATTTAAGAGTTTCATCACTCAGGATAGCATAAAATATATGCCTCTGCCTCTAGGGATTAAAATTTGTTCATTTAGATCTTTTGCAATGTAATTTTGGTTCGCTCATAGCATTCGCGCGAGGGTAGGATGGTTCTTTGCCGATTAAATAGATGTTGTTGTAGCACTACTATGATGTGACTCAATTAATAAGCAAGCTAAGTTTAATGATTGAAG 1237 0.4188 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPRCDICQDKAAFIFCVEDRALLCQDCDEPIHSAGSLSANHQRFLATGIRVPLSSNCTKENDKSRLEPSNRNAQQIAPKLPSHQVPSFSSSWAVDDLLELTDFESPDKKEFLEFGELEWLGDMGLFGEQFAQDALAAAEVPELPVTQTSNVASYRSSKSYNAYKKPRLEVLDEEDDDEHFTVPDLG 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00009 239 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bach9g00009 239 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 238 - -
Bach9g00009 239 CDD Bbox1_BBX-like 5 47 - -
Bach9g00009 239 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Bach9g00009 239 Pfam B-box zinc finger 52 95 IPR000315 GO:0008270
Bach9g00009 239 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Bach9g00009 239 SMART bboxneu5 52 99 IPR000315 GO:0008270
Bach9g00009 239 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bach9g00009 239 CDD Bbox1_BBX-like 57 98 - -
Bach9g00009 239 Gene3D Classic Zinc Finger 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00009 Bach-Chr9 89400 91569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00009 1 161 Orphan Transcription Factor Family AT1G06040 65.882 5.13e-71 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Bach9g00009 zf-B_box 1.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00009 - - vun:114183169 399.438