Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02892 CTCAACCAAAACCCAAAATACTTCTACCCTCTAGCGTTCATTTGAATAATTTTCCTATCCCTCCATTTTAGTAGCACAGATAATCTATTCCATTTTCTTTATTTTCCTGGGAAAGATCAGGGATGGAAATTTCCGGGGCAAACTGCAGCAATGGCATCATTGGCAATGGTTCCTTGAAGCTATGCAATACTGGGAATGTTAGCAATAATAATGACCCGCTGAATTGGAACATGGCTGCGGATTCACTGAAAGGTAGCCACCTAGAGGAGGTGAAGCGCATGGTGGAGGAGTACCGGAAGCCGGTGGTCCATTTAGCGGGGAAGAGCCTTACCATATCTCAGGTGGCTGCGATTGCCAACCACGATGCTGGTGTGGAGGTGAAGCTCTCGGAGGAGGCACGCGCCGGCGTCAAGGCCAGCAGTGATTGGGTCATGGAGAGCATGAACAAAGGAACTGATAGTTATGGAGTCACCACGGGGTTTGGTGCTACCTCACATAGGAGAACCAAACAGGGAGGAGCCCTCCAAAGGGAACTCATAAGATTCTTGAATGCCGGCATCTTTGGCAATAACACAGAAACCTGCCACACTTTGCCACACTCGGCCACAAGAGCTGCTATGCTGGTTCGAATCAACACCCTCCTTCAAGGCTATTCAGGCATCAGATTTGAGATCTTGGAAGCAATCACCAAGTTTCTGAACCATAACATTACCCCATGCTTGCCTCTGAGGGGCACAATCACTGCCTCTGGTGACCTTGTGCCTTTGTCTTATGTTGCTGGCTTATTGATTGGCAGACCCAACTCCAAGTCCATTGGACCTGATGGCAAAGTGCTCAGTGCTACTGAGGCATTTCAACTAGCTGGAATTGATGGTGGGTTTTTCGATTTGCAACCCAAAGAAGGTTTGGCACTAGTGAATGGCACTGCAGTTGGGTCTGGCTTGGCTTCCATGGTTCTTTTTGAGGCAAACATATTAGCTGTTCTCTCTGAGATCTTGTCAGCAATTTTTGCTGAAGTCATGCAAGGGAAACCAGAATTTACAGACCACTTGACTCATAAATTGAAGCACCACCCTGGTCAAATTGAGGCTGCAGCTATAATGGAGCACATTTTGGATGGAAGCTCATATATTAAGGCTGCACAGAAGTTGCATGAAACTGATCCTCTGCAGAAGCCTAAACAGGACAGATATGCTCTCAGAACTTCTCCTCAGTGGCTTGGACCACATATTGAAGTTATAAGGCAAGCAACAAAGATGATCGAGAGAGAGATCAACTCTGTTAATGATAACCCATTGATTGATGTGTCAAGGAACAAGGCGCTTCATGGTGGAAATTTCCAAGGTACCCCAATTGGTGTTTCTATGGATAACACCCGTTTGGCCATTGCTTCAATTGGGAAACTTATGTTTGCTCAATTCTCTGAGCTTGTGAATGATTTCTACAACAATGGTTTGCCTTCAAATCTGACTGCAAGCCGTAACCCAAGCCTTGACTATGGCTTCAAAGGAGCAGAAATTGCAATGGCATCTTACTGCTCAGAACTTCAATTCCTTGCTAATCCAGTCACCAACCACGTCCAGAGTGCAGAGCAGCATAACCAAGATGTGAACTCATTGGGTCTGATCTCCTCAAGAAAAACAGCTGAAGCTGTGGAGATTCTGCAGCTCATGTCCTCTACTTTCCTAGTTGCCTTGTGCCAAGCCATTGACCTGAGGCATTTGGAGGAAAGCTTAAAGAGCACTGTGAAGAACACTGTTAGCCAAATAGCCAAGAGAATCCTAACAATGGGTGTCAATGGTGAGTTGCATCCATCAAGGTTCTGTGAAAAGGACTTGCTCAAAGTGGTTGACCGTGAGTATGTCTTTGCTTACATTGACGATCCCTGCAGTGCAACTTACCCACTAATGCAGAAGCTGAGACAGGTCCTGGTGGATCATGCATTGGTAAATGGTGAGGCAGAGAAAAATTCAAGCACTTCAATCTTCCAAAAGATTGCAGCTTTTGAGGAAGAGCTCAAGACCCTTTTGCCCAAAGACGTAGAAAGTGCAAGGATTGAGGTTGAGAATGGAAAGTCAGCAATTCCAAACCAGATTAGGGAATGCAGGTCTTACCCATTATACAAGTTTGTGAGGGAAGAGCTGGGGACAAGTTTGCTGACAGGTGAGAAGATTAGGTCACCGGGTGAAGAATTTGATAAGGTGTTCTCAGCAATGTGTGAAGGGAAGTTGATTGATCCAATGTTGGACTGTTTGAAGGAGTGGAATGGTGCTCCCCTACCAATCTCTTAAAGGAAGATGCATGATACGTACCTATCATTATTATTTTTTTATAAAATTGATCACATATTTTATTTTTTCTACTTTTACTGTTATGTAATGAACCTGTAGAGGTGTTAACAGGTATTGAAAACGTGATAGTACACTGTTTATCTCATTCTTCTTCAATATGTTCTTTGTTTTTATTTTGTGCCTCCAAGTTGAGTACAAAACACAATGTCATTTAGTCAATAAAGTGCCATCCAAATTTTT 2531 0.4413 MEISGANCSNGIIGNGSLKLCNTGNVSNNNDPLNWNMAADSLKGSHLEEVKRMVEEYRKPVVHLAGKSLTISQVAAIANHDAGVEVKLSEEARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQRELIRFLNAGIFGNNTETCHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNHNITPCLPLRGTITASGDLVPLSYVAGLLIGRPNSKSIGPDGKVLSATEAFQLAGIDGGFFDLQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYIKAAQKLHETDPLQKPKQDRYALRTSPQWLGPHIEVIRQATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVEILQLMSSTFLVALCQAIDLRHLEESLKSTVKNTVSQIAKRILTMGVNGELHPSRFCEKDLLKVVDREYVFAYIDDPCSATYPLMQKLRQVLVDHALVNGEAEKNSSTSIFQKIAAFEEELKTLLPKDVESARIEVENGKSAIPNQIRECRSYPLYKFVREELGTSLLTGEKIRSPGEEFDKVFSAMCEGKLIDPMLDCLKEWNGAPLPIS 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02892 722 FunFam Phenylalanine ammonia-lyase 535 656 - -
Bach8g02892 722 Gene3D Fumarase/aspartase (Central domain) 269 717 - -
Bach8g02892 722 CDD PAL-HAL 67 532 IPR001106 -
Bach8g02892 722 FunFam Phenylalanine ammonia-lyase 22 268 - -
Bach8g02892 722 PANTHER HISTIDINE AMMONIA-LYASE 29 721 IPR001106 -
Bach8g02892 722 Gene3D - 22 268 IPR024083 -
Bach8g02892 722 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 204 220 IPR022313 GO:0016841
Bach8g02892 722 Pfam Aromatic amino acid lyase 69 543 IPR001106 -
Bach8g02892 722 Gene3D - 535 656 IPR023144 -
Bach8g02892 722 NCBIfam phenylalanine ammonia-lyase 31 712 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bach8g02892 722 FunFam Phenylalanine ammonia-lyase 269 563 - -
Bach8g02892 722 SUPERFAMILY L-aspartase-like 31 721 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02892 Bach-Chr8 35652326 35656317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02892 1 721 Monolignol Biosynthesis Gene Families AT2G37040 81.680 0.0 1249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02892 K10775 - rcu:8273543 1261.13