Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02885 TTTAAGCCTTTCTTACTCCCCTCTCTTCTCTTTCAAATCCCTCTTCTCAATCTTAAAACTTTTCTCTCTCTCTCTCTCTCTCACTCACACACCACAGCCATTTCTAACTTATTATCATACTCTGATTTAGAATGAAGAACCTGTAATGCCTTGTTTTGGCTTGTTGTTTCTTGGGATTTGAAGCTTTTGAACAGGATTTGAGCTTTGAAGCAACTTGTTACAGTTGTTCAGTTCAAATTGAAAAAGGATAAATTTTCAGAGAGAAAATGATCGGACCCAACTTCATGGACGAGATAGACTGCGGCAGCTTCTTCGACCACATCGACGACCTCCTCGATTTCCCCGCCGAAGATATTGACGCTGCCTTGCCCACCACCGGTAACTGCAACACTTTCCCGAGCATATATTCTGAGTCTTTGCCCTGCTCGGATTCGGTTTTCTCCAGGAACAGCACGTCGGACCTCTCGACGGAGCTCTCCGTTCCGTATGAAGACATTGTCCAATTGGAATGGCTGTCAAATTTTGTGGAGGATTCCTTCTCCGGGGGAAGCTTGACAATGAAGAAAGACGATGAGGCATCAGCATCAGCATCAGCTTCAGCAAATAAGCACTTCCAGACATCAAGCCCAGTTTCTGTCCTGGAAAGCAGCAGCTCTTGCTCTGGGGACAAGACTGTTCCTCGTAGCCCTGAAATTGTTGTCCCTGTGCCTTGTGGGCGCGCACGCAGCAAGCGCCCACGCCCTGCCACCTTCAATCCTCGTCCTGTAATGCAACTCATCTCACCTGCTTCCTCTGTCGGCGAAAACACACAGCCAAATCTGGTTTCCAAGCCATGGTCTTCAGATTCTGACAGTGCCGCGGACTCTCATCCTCTCATGAAGATCCCCAAACAAGTCTCCATTGAGCATAAGAAGAAAAAGAAGATCAAACTCACGTTCACATCTTCATCATCATCGTCATCTCCAGCTGATACCAATCACGGCTCCCCAACACAAGCAGTTAGGAAATGCATGCATTGTGAGATAACCAAGACACCACAATGGAGAGCAGGACCAATGGGGCCTAAGACCCTTTGCAATGCATGTGGGGTTCGTTACAAGTCTGGCCGTCTATTCCCAGAATACCGCCCTGCTGCAAGCCCAACTTTTTGCCCATCAGTGCACTCCAATTCCCACAAGAAAGTGCTGGAGATGAGAACCAAGGTTGCAACCAAACCTGCTCTGCCAGACAATCCAGTTGATGATGCAGAACTCATTCCAAACACTAATACCAGCCTTGCCCTGGAATATATTTGAATCCGGAATAAGAATGAGAATGATCCTAGTTCACTCTAGAGACTCCCTGCAGTCTTATGCTATTCCATATTCATATTTTATTTCTTTTTTCATTGTTTTTTTGTACAGGAATGGAATGATGGGGAAATAGGAGTTGTTAGAGGAGGATTGTAATGACAAGTCAAGAAAAAGGGGTAGAGATATATGCAAGTCAAAGAAGGGTAGACGTTTTAGGTTCTAGTAATTTGTAGGTCTTTGAGGGGTCATTAGGTGTTGCTGTCTTAATTTGGAGTCTCTCTCTCTTTTTTGCATTCTTTTCATTTTTTCTTATTTCTTTTTAAAAATCCCTCTCTGTGGGAATTCTTTTTGCAGTTCAGTTGTAGCAAAAATTTCTGATTGAGTAAGGAACATTTAAAT 1691 0.4435 MIGPNFMDEIDCGSFFDHIDDLLDFPAEDIDAALPTTGNCNTFPSIYSESLPCSDSVFSRNSTSDLSTELSVPYEDIVQLEWLSNFVEDSFSGGSLTMKKDDEASASASASANKHFQTSSPVSVLESSSSCSGDKTVPRSPEIVVPVPCGRARSKRPRPATFNPRPVMQLISPASSVGENTQPNLVSKPWSSDSDSAADSHPLMKIPKQVSIEHKKKKKIKLTFTSSSSSSSPADTNHGSPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPSVHSNSHKKVLEMRTKVATKPALPDNPVDDAELIPNTNTSLALEYI 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02885 342 ProSitePatterns GATA-type zinc finger domain. 248 273 IPR000679 GO:0006355|GO:0043565
Bach8g02885 342 PANTHER GATA TRANSCRIPTION FACTOR 15 313 - -
Bach8g02885 342 CDD ZnF_GATA 247 304 IPR000679 GO:0006355|GO:0043565
Bach8g02885 342 MobiDBLite consensus disorder prediction 173 201 - -
Bach8g02885 342 PIRSF Txn_fac_GATA_plant 2 331 IPR016679 GO:0003677|GO:0005634|GO:0045893
Bach8g02885 342 FunFam GATA transcription factor 238 322 - -
Bach8g02885 342 SMART GATA_3 242 292 IPR000679 GO:0006355|GO:0043565
Bach8g02885 342 Pfam GATA zinc finger 248 281 IPR000679 GO:0006355|GO:0043565
Bach8g02885 342 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 246 305 - -
Bach8g02885 342 ProSiteProfiles GATA-type zinc finger domain profile. 242 278 IPR000679 GO:0006355|GO:0043565
Bach8g02885 342 MobiDBLite consensus disorder prediction 109 139 - -
Bach8g02885 342 Gene3D - 243 292 IPR013088 GO:0006355|GO:0008270
Bach8g02885 342 MobiDBLite consensus disorder prediction 173 198 - -
Bach8g02885 342 MobiDBLite consensus disorder prediction 223 242 - -
Bach8g02885 342 MobiDBLite consensus disorder prediction 217 242 - -
Bach8g02885 342 MobiDBLite consensus disorder prediction 109 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02885 Bach-Chr8 35588359 35591723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02885 19 312 C2C2-Gata Transcription Factor Family AT4G32890 36.824 4.89e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bach8g02885 GATA 5.8e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02885 - - qsa:O6P43_005032 436.417