Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02878 GTTTCTTCCTTTTTCTCCTACTCTCTCTGCCAAAAGGGTGTCTATGGCTAAGGACGTTGAGGTTGCCGAGCGTGGGTCCTTCTCCGGCAAGGACTACCACGACCCACCTCCGGCACCGCTCGTTGACTTTGAGGAGCTCGGAAAATGGTCCTTTTACAGGGCTTTGATAGCTGAGTTCATTGCCACTTTGCTTTTCCTTTACATTACTGTGCTCACTGTGATTGGTTATAAGAGCCAGACCGATCCCGCAATACATACTGATCCATCTGATGCTTGTGGTGGGGTTGGTGTTCTTGGGATTGCATGGGCTTTTGGCGGCATGATCTTCATACTCGTTTACTGCACTGCTGGAATTTCCGGAGGCCACATTAACCCAGCGGTGACATTGGGGCTCTTCTTGGCTCGCAAGGTGTCTCTGCTCCGAGCCATCTTCTACATGGTGGCTCAGTGCTTGGGTGCTATCTGTGGAGTTGGGTTGGTCAAGGCCTTCCAAAAATCTTTGTACAAAAGGTATGGTGGTGGTGCCAACGAGCTTGCTGAAGGTTACAGCACCGGCACTGGATTGGGTGCTGAGATCATTGGAACCTTTGTTTTGGTATACACAGTGTTCTCTGCTACTGATCCCAAGAGGAATGCTAGAGATTCCCATGTCCCGGTTTTGGCTCCACTTCCAATTGGGTTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCGTCACCGGCACCGGCATTAACCCTGCTAGGAGCCTTGGAGCTGCTGTTATCTACAACCAAGAAAAAGCCTGGGATGACCATTGGATCTTTTGGGAGCAACCCCACCGTTTGATTTATCTTCCTCTTCAAGGTTACAAAAGTGGAGTTGAGGATATGATGGAACCAAGTACTGTAGATTAA 895 0.4972 MAKDVEVAERGSFSGKDYHDPPPAPLVDFEELGKWSFYRALIAEFIATLLFLYITVLTVIGYKSQTDPAIHTDPSDACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTLGLFLARKVSLLRAIFYMVAQCLGAICGVGLVKAFQKSLYKRYGGGANELAEGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNQEKAWDDHWIFWEQPHRLIYLPLQGYKSGVEDMMEPSTVD 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02878 283 NCBIfam MIP family channel protein 43 258 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g02878 283 PRINTS Major intrinsic protein family signature 90 114 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g02878 283 PRINTS Major intrinsic protein family signature 127 146 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g02878 283 PRINTS Major intrinsic protein family signature 176 194 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g02878 283 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g02878 283 PRINTS Major intrinsic protein family signature 212 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g02878 283 Pfam Major intrinsic protein 32 258 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g02878 283 SUPERFAMILY Aquaporin-like 31 255 IPR023271 -
Bach8g02878 283 CDD MIP 39 255 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g02878 283 ProSitePatterns MIP family signature. 108 116 IPR022357 -
Bach8g02878 283 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 8 258 IPR034294 -
Bach8g02878 283 Gene3D Glycerol uptake facilitator protein. 24 264 IPR023271 -
Bach8g02878 283 FunFam Probable aquaporin PIP1-2 24 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02878 Bach-Chr8 35535745 35538638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02878 1 258 Major Intrinsic Protein MIP AT3G54820 80.620 3.57e-153 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02878 K09872 - aew:130771947 471.085