Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02862 ATGAAAGAGGGTAAAATAGACCTTAAGGGTCGTCGAAGGTCAAGGGAAAATGCACAGTTAATCAAGGTTTTAGCTGAATTCAGAGTTCTTCGGTTCCAAGCCATGGGAAAAGAGAAGGTTCACATCAACATTGTGGTCATTGGCCATGTCGACTCTGGTAAATCCACCACCACTGGTCACTTGATCTACAAGCTTGGAGGAATTGACAAGCGTGTTATCGAGAGGTTTGAGAAAGAGGCTGCTGAGATGAACAAGAGGTCATTCAAGTACGCATGGGTGCTTGATAAGCTCAAGGCTGAGCGTGAGAGAGGTATTACTATTGATATTGCCTTGTGGAAGTTTGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCTGGTCATCGTGATTTTATCAAGAACATGATCACTGGAACATCTCAGGCTGATTGTGCTGTCCTCATCATTGATTCCACAACTGGTGGTTTTGAAGCTGGTATCTCCAAGGATGGACAGACCCGTGAGCATGCCCTCCTTGCTTTCACTCTTGGAGTGAAGCAAATGATTTGCTGCTGTAACAAGATGGATGCCACTACCCCCAAGTACTCTAAGGCCAGATATGACGAAATTGTAAAGGAAGTTTCTTCTTACCTGAAGAAAGTCGGTTACAACCCTGATAAGATTCCCTTCGTTCCCATCTCTGGGTTTGAGGGTGACAACATGATTGAGAGATCCACCAACCTTGACTGGTACAAGGGTCCAACCCTTCTTGAGGCTCTTGACCAGATCAATGAGCCCAAGAGGCCCTCTGACAAGCCTCTCCGTCTTCCACTTCAGGACGTGTACAAGATTGGTGGTATTGGTACTGTACCTGTGGGACGTGTTGAGACCGGTGTCTTGAAGCCTGGTATGGTGGTGACTTTTGGTCCCTCTGGTCTGACAACTGAAGTTAAGTCTGTTGAGATGCACCACGAGGCTCTACAAGAGGCACTTCCTGGTGACAATGTTGGGTTCAATGTTAAGAATGTTGCAGTCAAGGATCTTAAGCGTGGTTATGTTGCTTCCAACTCTAAAGACGATCCTGCAAAGGGAGCTGCTAGCTTCACATCCCAAGTTATCATCATGAACCACCCTGGACAGATCGGAAATGGCTATGCCCCAGTGCTGGATTGCCACACTTCCCACATTGCTGTCAAGTTTGCTGAGATATTGACCAAGATTGACAGACGATCAGGTAAGGAGATTGAAAAGGAGCCCAAATTCTTGAAGAACGGTGATGCTGGTATGGTCAAGATGATTCCCACCAAGCCCATGGTGGTTGAGACTTTCTCTGAGTATCCTCCACTCGGTCGTTTTGCTGTGAGGGACATGCGTCAAACTGTGGCTGTCGGAGTCGTCAAGAGTGTTGACAAGAAGGATCCCACTTCAGCCAAGGTCACCAAGGCTGCACAGAAGAAGGGTGGCAAGTGATTTCCCTTGCTGATATTTCTGGAAGCAAATATTATGATTACATGAAAAACTGGTTGCTCATTAGTAGTTTATCCATTTGAGAGTTTAGAGGTTTATTTTAATTTTATCAAGAGTCTTTTGTTTTGTTTTAATATCTAGAGCTTTTTGAGAACTCCATTTTCACAAGCAGCCATAGGGTTTATGATTGCTTTTGTGCTGCTGAGGATGTTTTATTTGCAATTATATGAGTCTTTTTCTCAACCTTCTATTTGTTAAGCTT 1711 0.4483 MKEGKIDLKGRRRSRENAQLIKVLAEFRVLRFQAMGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVVKSVDKKDPTSAKVTKAAQKKGGK 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02862 483 Hamap Elongation factor Tu [tuf]. 36 466 IPR004539 GO:0003746|GO:0005525|GO:0006414
Bach8g02862 483 Gene3D Translation factors 357 464 - -
Bach8g02862 483 NCBIfam translation elongation factor EF-1 subunit alpha 35 467 IPR004539 GO:0003746|GO:0005525|GO:0006414
Bach8g02862 483 SUPERFAMILY Translation proteins 260 355 IPR009000 -
Bach8g02862 483 PANTHER TRANSLATION FACTOR 37 467 - -
Bach8g02862 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 283 IPR027417 -
Bach8g02862 483 Pfam Elongation factor Tu C-terminal domain 356 463 IPR004160 -
Bach8g02862 483 CDD EF1_alpha_III 357 460 - -
Bach8g02862 483 CDD EF1_alpha 43 261 - -
Bach8g02862 483 Pfam Elongation factor Tu GTP binding domain 40 256 IPR000795 GO:0003924|GO:0005525
Bach8g02862 483 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 360 464 IPR009001 -
Bach8g02862 483 PRINTS GTP-binding elongation factor signature 122 132 IPR000795 GO:0003924|GO:0005525
Bach8g02862 483 PRINTS GTP-binding elongation factor signature 138 149 IPR000795 GO:0003924|GO:0005525
Bach8g02862 483 PRINTS GTP-binding elongation factor signature 182 191 IPR000795 GO:0003924|GO:0005525
Bach8g02862 483 PRINTS GTP-binding elongation factor signature 43 56 IPR000795 GO:0003924|GO:0005525
Bach8g02862 483 PRINTS GTP-binding elongation factor signature 102 110 IPR000795 GO:0003924|GO:0005525
Bach8g02862 483 Gene3D - 31 262 IPR027417 -
Bach8g02862 483 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 39 264 IPR000795 GO:0003924|GO:0005525
Bach8g02862 483 Gene3D Translation factors 263 350 - -
Bach8g02862 483 FunFam Elongation factor 1-alpha 263 350 - -
Bach8g02862 483 FunFam Elongation factor 1-alpha 35 260 - -
Bach8g02862 483 CDD EF1_alpha_II 264 354 - -
Bach8g02862 483 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 95 110 IPR031157 -
Bach8g02862 483 Pfam Elongation factor Tu domain 2 282 347 IPR004161 GO:0005525
Bach8g02862 483 FunFam Elongation factor 1-alpha 357 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02862 Bach-Chr8 35372645 35377125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02862 35 483 Eukaryotic Initiation Factors Gene Family AT5G60390 96.659 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02862 K03231 - han:110927094 890.182