Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02840 TTTTATTCCTCTTCCGAGATGGAAGCTGATGTATCTATCAATTGGGTTCTGATTTCTAAACCCTAATAAGAAAAATCTCATCTTTCTCTGTCTGTGTTGTGGATGATTTTCACCGAAGGAATTACGATTTTGTGCTCTTCAAATCTTTTGTTTTGATGAGGACCATGAATCTTCTCGTGTTTTTCTTTTCTCTGTTGGTTGGATGTTGTATGGCGGCAGCCAAAGTGGTGCTGATTGGGAGCAATGTCACTCTTTCCTTCGACGATATTGAAGCTAATTTCGCTCCAACAATCAAAGGTTCTGGAGAATGCGGGGTATTACATTTGGCTGAGCCACTTGACGCTTGTACGGCACTGACAAATAAAGCTGAACAACTTTCAAATGCGAGTAACCCTTTTGTTATCATTGTTCGAGGAGGATGTAGCTTTGAAGAGAAGGTGAGAAGAGCGCAGAAGGCTGGCTTCAAAGCGGCAACTATCTATGACAATGAAGATGATGGTGTCTTGATAGCAATGGCAGGAGACTCAGCTGGTATACGTATACATGCTGTATTTGTTTCTAAAGCTTCGGGTGAAATCCTAAAGAAATATGCTGGATTGACTAACTTCGAACTTTGGCTAATTCCAAGTTTTGAAAATTCAGCATGGTCTATTATGGCCATTTCATTCATTTCCCTTCTAGCCATGTCTGCAGTTCTAGCCACTTGTTTCTTTGTCCGAAGGCATCGCATTAGAAGAGAAAGGCCGCAAGCTTCTCGTGTCCGCGAATTCCATGGAATGAGTAAGCGCCTAGTGAAAGCAATGCCAAGTTTGATATTCACCGCTGTTGTTTCAGAGGATAACAGTACGTCAAGAACTTGTGCAATATGCCTTGAAGACTATAGTGTTGGAGAGAAGCTTAGGATTCTTCCCTGCTGTCACAAGTTTCATGCTATGTGTGTCGATTCTTGGCTTACTTCATGGAGAACCTTCTGTCCTGTTTGCAAGCGCGATGCAAGAACTGGTTTAAATGATCCACCACCTTCAGAATCGACACCTTTGCTTTCATCAGCATCTTCGTTGTTGTCATCTGCAAGGTCATCATTTGTATCATCTTCAGCTATACAAATTGCCCCAGCAACATCACGGTCGCCATCTGTTTCTCGTAACCACTCTCTTGCTAGCACCCCTTATGTTCAGCCATCTCTGAGGTCCTACCGCCAATCACCCTCTCTAAGTATCAACCGAAGCTCAGTAGACGTCAGAAATGCATCCCAAAGATCTCAAGCTTCACATTTGATATCCCCACATTCCATGGGGTACCCAACTTTATCATCTCTGAACTCAAGGTACATGTCTCCTCATATTCCAAGTTCAAGCAATGCTTCAGCAAGTTTTCTTGGTTCTTCTAGTCATCATCAGCACCCACTTCGTTATAGTGAATCCGCCACAAGTTTTTCTCCATTTGCTTCTGCCCATTCTCTTCCAGATTGCTAA 1475 0.4285 MRTMNLLVFFFSLLVGCCMAAAKVVLIGSNVTLSFDDIEANFAPTIKGSGECGVLHLAEPLDACTALTNKAEQLSNASNPFVIIVRGGCSFEEKVRRAQKAGFKAATIYDNEDDGVLIAMAGDSAGIRIHAVFVSKASGEILKKYAGLTNFELWLIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERPQASRVREFHGMSKRLVKAMPSLIFTAVVSEDNSTSRTCAICLEDYSVGEKLRILPCCHKFHAMCVDSWLTSWRTFCPVCKRDARTGLNDPPPSESTPLLSSASSLLSSARSSFVSSSAIQIAPATSRSPSVSRNHSLASTPYVQPSLRSYRQSPSLSINRSSVDVRNASQRSQASHLISPHSMGYPTLSSLNSRYMSPHIPSSSNASASFLGSSSHHQHPLRYSESATSFSPFASAHSLPDC 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02840 439 Gene3D - 24 153 - -
Bach8g02840 439 MobiDBLite consensus disorder prediction 345 380 - -
Bach8g02840 439 CDD PA_C_RZF_like 13 163 IPR044744 -
Bach8g02840 439 FunFam Receptor homology region transmembrane domain-and RING domain-containing protein 2 194 282 - -
Bach8g02840 439 Pfam Ring finger domain 234 277 IPR001841 -
Bach8g02840 439 SUPERFAMILY RING/U-box 215 290 - -
Bach8g02840 439 ProSiteProfiles Zinc finger RING-type profile. 235 277 IPR001841 -
Bach8g02840 439 Pfam PA domain 62 142 IPR003137 -
Bach8g02840 439 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 194 282 IPR013083 -
Bach8g02840 439 SUPERFAMILY PA domain 77 158 IPR046450 -
Bach8g02840 439 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Bach8g02840 439 FunFam Receptor homology region transmembrane domain-and RING domain-containing protein 2 22 156 - -
Bach8g02840 439 SMART ring_2 235 276 IPR001841 -
Bach8g02840 439 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 158 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02840 Bach-Chr8 35020704 35025209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02840 21 438 C3H Transcription Factor Family AT1G22670 49.065 2.37e-121 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02840 K15692 - gmx:100791248 644.425