Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02800 ATGGATAAGCTTGATGATGTGATTTTGCCCGGTTTTCGGTTCCACCCCACAGATGAAGAGCTTGTTGATTTTTACCTCAGAAGAAAAATTCAGCAGCAACCTCTTTCTATTGAGCTGATTAAGCAAGTCGATATTTATAAATATGATCCATGGGATCTCCCAAAGCTGGCGAGTACTGGAGAGAAAGAATGGTACTTCTACTGCCCAAGGGATCGAAAGTACAGAAACAGCACACGGCCGAATCGTGTAACAAGAACTGGGTTTTGGAAGGCAACTGGAACTGATCGCCCTATATACTCCTCAGATGGAAAATGCATTGGTTTAAAGAAGTCTCTGGTGTTTTACCGAGGAAGAGCTGCCAAAGGGATCAAAACTGATTGGATGATGCATGAGTTTCGCCTTCCTTCTCTATCAAACTCTTCTGCTTCTCCCAAAAAGCTCATGGACAAAACCCTCCCTGCAAGAGATTCATGGGCAATTTGTAGAATATTCAAGAAAAACAACATGTCCATGGCACAAAGGGCTTTATCTCTCTCTTGGATGAATCAGTTACCAGAAAGTATGGTCTCTGATATACTCAGTCAAGGTACAAACTGCAATCAGTTCATCAGTTCAGAGAATATTTCCTGCACAACAGAAATAGGATCAGCAGCCATTCAATATTTTGATGGCAAGGAATTATACCAGCAAGTGTCAAGTGCTAATCCCACAGCTTGTTCAGAGAATGTCCATACTCCCTCTTACAAGCCCATCAGTAATAATAACAGTACAGTGTCCAGGTCTTCCCAGTTTCCTGTGTTAATGAATGGAGACTTTGGTGACAGCAGCTTCATCTTGTCAACTCTTGAAGAGTCAACTGAGGGGGCTGCCAAGTGTGCTGCTGATGCTAGTTCTATGCTTTTCAACCCTGACTGTTTAAGCTTTGAAGGGCCAAATCAGCAATTTAGTGGCTTCTCATGTAATGTTGCTCAAGATAGCATCAACATAGATGAGCAAGGGTGCAGGAAGAGTGTGAACCCAGCTCCATCACAGTGGGAGATTACAGGGAGAACCATTGGATTTTCCTTCGGATTACCTCCAAATGACACTACTAATTGGAAGGCTGCTCTACCATGGGACTCACCCTCACCCTCTTGTCCTAGTGATATGTCCACTAGCTATTCCACTAATAAGTGCTACACTTAA 1185 0.4312 MDKLDDVILPGFRFHPTDEELVDFYLRRKIQQQPLSIELIKQVDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSTRPNRVTRTGFWKATGTDRPIYSSDGKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRLPSLSNSSASPKKLMDKTLPARDSWAICRIFKKNNMSMAQRALSLSWMNQLPESMVSDILSQGTNCNQFISSENISCTTEIGSAAIQYFDGKELYQQVSSANPTACSENVHTPSYKPISNNNSTVSRSSQFPVLMNGDFGDSSFILSTLEESTEGAAKCAADASSMLFNPDCLSFEGPNQQFSGFSCNVAQDSINIDEQGCRKSVNPAPSQWEITGRTIGFSFGLPPNDTTNWKAALPWDSPSPSCPSDMSTSYSTNKCYT 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02800 394 Gene3D NAC domain 17 171 IPR036093 GO:0003677|GO:0006355
Bach8g02800 394 SUPERFAMILY NAC domain 8 166 IPR036093 GO:0003677|GO:0006355
Bach8g02800 394 FunFam NAC domain-containing protein 35 17 169 - -
Bach8g02800 394 ProSiteProfiles NAC domain profile. 8 166 IPR003441 GO:0003677|GO:0006355
Bach8g02800 394 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 242 - -
Bach8g02800 394 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02800 Bach-Chr8 34627027 34628798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02800 3 208 NAC Transcription Factor Family AT1G26870 70.192 2.84e-98 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach8g02800 NAM 1.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02800 - - cave:132183349 470.314