Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02790 CCGGCATTGAGGCTTTTCCGCCATATACCGGAGGCACCACGCCGCGGTTACTATGTAATGTCCGGCGAAGTCATTCTTTATATCGTCCCTCGATTTCTGGTATGACTCTTTTTCTGAATTGCAATCTACGAAGGTGTAAGTTTAAGTATGGCAATATTACTTAAAAGAAATGGGTTTGTGTAGAGTGGAATAATGGTCAAGGTAATGACTAATGAGTCAAGAACAAAGTAGAGTGAACGATTAATGTGAAAATTTTTACACTGATGGCCCTCAACATTGAAACCTTCCAAAGCATATGCCCATCTCAATTCATCTCCTTCACTATTCCCCATCCAACCTGTTCTGATTCACAACTCCGAGTTGCTGTTCTAGATTCACCAGTCCAACCCACTGACTCACCCAAAGTTGCTGCAATGTTAGTCCCTGAAGCCCGTGAAGGTGATTGGATCTTTTCCACGGAATCAGGTCATTTCCAGCTGCTCTTTAGCTCTCCTGGTATATCCCGCTTGATTTTGGTTGGAAACCAATTCAAAGGGGGTGATTTTCCTCCACCTATTTATAAATGTTCACTTGAATGTTCTTCGCATCATAAAGAACTTGAAATTTGGTCAAAATCCCTTCTCCTTGCTCTATCTCCAAAATCCTTATTCAAAAATGGCATTCCCGAAATACCCATTTTGACTTATGAAGATAATGTGGTTTCCAGTGTAGTAATACATAAATGTGTGGGTTCTCTTGTTGGTGAAATGTTGGTTGAAGATGTGGAAATTGAGACCAAGAATGAGGTGGATGGTTGTCAAAAAAAGGAATTTCGAAGGCGATTGAGGTTCAAGAGGATGCCTAATTTGATCCAGACAGAGATTCGTATAGTTCCTGACACAGATTTTAGTACAAATGGTGTGGTGGGTATTGGAGAAGTGGCCTTTGTGCCTGATCTTCAGGTTCTGGTACACCCGTACTTGGCCCCAATGGTAGCTAGCCTTTCACTGATCAGTGAATATATAGAGGGACGTATCCAGCATGGGTTTATACCAAAAGCTTTGTGTGTTGGGGTTGGAGGCGGGGCTTTGCTTTCTTTCTTGAGAAACCAATTGGGTTTTGAGGTCATGGGTGTGGATGCTGATAAGGAGGTTTTGAGGGTTGCAAAACACTATTTTGGATTGGAAGATGCTGAATTTATGCATGTTACTGTTGGGGATGCTATTAAATTTATGAAGAAGCTTGCATGTCAGGAAAATTGCAATACTTCTGCTGCAAGTGAGCTCAAGGCCCCTAGTCACTTTCTTGATGGTGAAGATGTCAATAAAAAATTTGATGTTATCATGGTTGATTTAGATTCAAGTGATGCAAGGACTGGTATAAGTGCTCCACCATTGGAATTTGTCAGGAAGCATGTTCTTCTGGCTGCTAAATTAGTTCTTTCTGAATTTGGAATTCTTGCTATGAATGTCATTCTTCCAAGCAGGTCTTTCTATTGCAAACTAGTTCATCATTTTCAGCAAGTTTTCGAAGATTTATACCGGATAGATGTTGGGAATGGGGAGAATTTTGTTCTTGTTGCCACAGTATCATCCCAGTTAGCTAATCTTCACTTCACCACTCGATCACCACCGGGGACTCTACCGCTATTCGCAGGAGACAGCGACACTCGGCGCCGTATCATCGCCGACGAAAGTGACCTTTCTGTTTCTTTTCGCCTCTCAGTACCTCCGTCAGTGGAAAAGCAAGGTGATGTTCTGATGGTAAAGCAAAAGGTTGAACATGTTATGTCAGAAAGAAAAAGGAAAAAGAAGAAGGAAGAAGTTTCTATACCTCGGCCTGCATGCTCATGGGTGTATTTTAGCAAGGAGTTCATAAAAGAGTACATTGCTTCCCATCCTGAGTCCTCTGGCCTTAAAGCTGCAACAAAGGCTGCATCAGATGCTTGGAAGTCAATGAACCCTGAAGAGAAGGAAAAATATACTAGGCATGCTCGTGAAGTGTGGAATGGCTACATAAGTACAACTCCTGCTCGTAGCCCAAAGCCAAGGAAACAGACTAAACTTGTCACAAGATGCTCTCCCGGTCGCTTATTCAATGTGTTACAGCGCCTTACACTTGAACAACAGGATGCAGTTAAGAGTATGGGCTTTGGCAGCCTCCTTGGCCTTAGATGCCGTACACTTCGTCGAAGTTTGTGCCTTTGGCTATTAGAGAGGTTTAACACCCCAAATTGCAGCTTGGAAATCTGTAAAAAGCAAATTTCTTTAACTCCTAAAGATGTAGAGCAAGTAATGGGATTATCAGCTAGTGGAAAGGATGTAGTGAACTCAGGGCCAGATGAATTGATTTCAGACTTACGTAACCGCTATAATGCTACAAATCATGGAATTTCTGTGCGATTTTTAGAGGACAGATTGGTAGATCTGGAAGCTGGAGAGGATTTTAAGAGATCCTTTGTCCTCTATGCACTAGGCACTCTTTTGTCCCCAACAGCTAGGCTTGATGTGAGCCCTTCCTTCCTCCACTTCTTAACAAATATGGATCTGGTTCATCAGTACAACTGGGGTAAATTCTTGCTTGATAGGCTAGTTCGAGAGGTATCACGCTTCCATCAGGGAAAGCAACGAGCTGTTGGTGGTTGTCTTCTGTTTCTACAGCTTTTCTACTATGAGAGCATCTCCCTTGAGGGATCTTCTACTTTAGGGCCCTCTGCTGTTCCATGCCTGTTTTCTTGGGGAGAGGAAGAGATTACTGAAAGAGAAAAACGAGAAAAAGAACTTGGCGGCTATGGGTTTGGGGAGGTGATATGCCAGGAGAAATGCCACAATATTGAGCTTTCAGAATACAGAGATCAACTGGATACTCTATCAATTGGTACAATAAGTACTAGGATTGAGCATGGTGCTGTGCTAGAACAGGAATTCAATGAGGAAAACATCCCAGTTTTTCTCAAGACTCAACCTGTGGTATGTGGAGATGTGGAGGTAGTTGTTGAATCAGTCAAAGCCCCATGCCAAAATAAAGAATATGGATGCAATGACACTGTGGATTACATCAACAATAATGAACATGAGGCAACATGCATCTATGCTCCATGTGCCTGTCCGCATCAGGAGTGCAACTATATTGGATCATCCGAACAGTTAGCCCTACACTTTAGCAGTAAACATTGGGATTCTGGAAGGCGATTCAAATACAACCACCCATTGGCTGTCTCCTTAAAGGTGGATGAACAATACCTTGTTCTCCAGGCAGAAGAAGATGGTATTCTCTTCCTCCTCAACAAGGTCTCAGTAACTAATGGAAATACAGTGATGATCACTTGTATAGGTCCAAGCTCATCGAAGGAGAGGTTCCTTTATGATATTGTATCATGTAGAGGAAATAGTTCTCTCAGATTAAAGTCAGAAACTGAGAGTTTTCCTGGGAGAATCGAGGAAAATTATTTTCCTGGAATGGACTTTCTTTTTATTCCTCTCCATTTCCTTGCTTCTTCTGGGCGGCTCAATTTAGAAATCTGTATATGGAATTCTAGGGAACATAATGCAGATTGGTCTTGA 3542 0.4224 MALNIETFQSICPSQFISFTIPHPTCSDSQLRVAVLDSPVQPTDSPKVAAMLVPEAREGDWIFSTESGHFQLLFSSPGISRLILVGNQFKGGDFPPPIYKCSLECSSHHKELEIWSKSLLLALSPKSLFKNGIPEIPILTYEDNVVSSVVIHKCVGSLVGEMLVEDVEIETKNEVDGCQKKEFRRRLRFKRMPNLIQTEIRIVPDTDFSTNGVVGIGEVAFVPDLQVLVHPYLAPMVASLSLISEYIEGRIQHGFIPKALCVGVGGGALLSFLRNQLGFEVMGVDADKEVLRVAKHYFGLEDAEFMHVTVGDAIKFMKKLACQENCNTSAASELKAPSHFLDGEDVNKKFDVIMVDLDSSDARTGISAPPLEFVRKHVLLAAKLVLSEFGILAMNVILPSRSFYCKLVHHFQQVFEDLYRIDVGNGENFVLVATVSSQLANLHFTTRSPPGTLPLFAGDSDTRRRIIADESDLSVSFRLSVPPSVEKQGDVLMVKQKVEHVMSERKRKKKKEEVSIPRPACSWVYFSKEFIKEYIASHPESSGLKAATKAASDAWKSMNPEEKEKYTRHAREVWNGYISTTPARSPKPRKQTKLVTRCSPGRLFNVLQRLTLEQQDAVKSMGFGSLLGLRCRTLRRSLCLWLLERFNTPNCSLEICKKQISLTPKDVEQVMGLSASGKDVVNSGPDELISDLRNRYNATNHGISVRFLEDRLVDLEAGEDFKRSFVLYALGTLLSPTARLDVSPSFLHFLTNMDLVHQYNWGKFLLDRLVREVSRFHQGKQRAVGGCLLFLQLFYYESISLEGSSTLGPSAVPCLFSWGEEEITEREKREKELGGYGFGEVICQEKCHNIELSEYRDQLDTLSIGTISTRIEHGAVLEQEFNEENIPVFLKTQPVVCGDVEVVVESVKAPCQNKEYGCNDTVDYINNNEHEATCIYAPCACPHQECNYIGSSEQLALHFSSKHWDSGRRFKYNHPLAVSLKVDEQYLVLQAEEDGILFLLNKVSVTNGNTVMITCIGPSSSKERFLYDIVSCRGNSSLRLKSETESFPGRIEENYFPGMDFLFIPLHFLASSGRLNLEICIWNSREHNADWS 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02790 1092 SUPERFAMILY HMG-box 502 578 IPR036910 -
Bach8g02790 1092 Gene3D Vaccinia Virus protein VP39 215 453 IPR029063 -
Bach8g02790 1092 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 516 585 IPR009071 -
Bach8g02790 1092 Gene3D High mobility group box domain 500 583 IPR036910 -
Bach8g02790 1092 SMART hmgende2 515 586 IPR009071 -
Bach8g02790 1092 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 257 437 IPR029063 -
Bach8g02790 1092 Pfam Seven in absentia protein family 900 1030 IPR018121 GO:0005737|GO:0006511|GO:0007275
Bach8g02790 1092 CDD AdoMet_MTases 258 398 - -
Bach8g02790 1092 ProSiteProfiles Zinc finger SIAH-type profile. 906 964 IPR013010 GO:0008270
Bach8g02790 1092 Pfam Plant mobile domain 662 800 IPR019557 -
Bach8g02790 1092 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 569 1085 IPR044286 -
Bach8g02790 1092 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 902 959 IPR013083 -
Bach8g02790 1092 CDD HMG-box_SF 518 572 - -
Bach8g02790 1092 Pfam HMG (high mobility group) box 516 582 IPR009071 -
Bach8g02790 1092 SUPERFAMILY TRAF domain-like 906 1081 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02790 Bach-Chr8 34523768 34531069 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Bach8g02790 Sina 2.5e-16 CL0389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02790 - - qsa:O6P43_008706 880.552