Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02758 ATGGAAGCTGCAGAGGAACTCGCTTCAGGGTCAAAAGAGCAAACCCACATCGTCAAAGGGAAGAGAACCAAAAGGGTAAGGCCACAATCCCCAGTCCCCTTCTCCATTACTGGCAATTCTCCCAACCATGGTCATGGTGAAGCTCAAGATGATTCCAACAATGGTGGTGAAGATGACAAAAGCTCCCCTGCCACCACGACCAGACACCGACATAGTACAGAAGAAGAGGAGGACATGGCCAATTGTCTGATCCTTCTAGCTCAGGGCCAATCCCGGGAATCTCCGAAACCCGCCGTGGGAGATGATGGCATGAATTATACCAAGTACAGTAGTAGAAGATTCATGGAAGCTGCTTCTTTGGGTTCTGGCAAAGCAGGGTTTTATGTTTATGAATGCAGGACCTGTAACAAAACATTCCCTTCGTTTCAAGCACTTGGCGGACACAGAACAAGTCACAAGAAGCCTAAAGCCATGGCTGCTTTCACGGCCGCCATTGATAACGACAAGAAGCAACTCTTGTTCATGTCCGATGAAGATGAATTTCAATTCAAGAACAACAACAGCGGCAACCCATTTTCTCTTCAATTGAACAGAGGGAATTTGTGCAGCAACAAACCAAAGGTCCATGAGTGCTCTGTCTGTGGTGCTGAGTTTACATCAGGGCAAGCTTTGGGTGGTCATATGAGGCGACATCGGACACCCATTGGGACCAATACGATGTTGTCTTTGATCCCAATGGCTTTGGAACCAGAAGAACAACAACAACCCAGAAAGAGAAGGAACGTTTTGTCTTTGGATTTAGATCTCAACCTTCCAGCACCAGAAGATGATCAAACAGAATCAAAGTTTTCCTTCGCATCCAAGCAACAAGAACAACATAAGCAGCAGCAAAAACAACATCAGCAACACCAAGCAAGTCTTGTCTTCACCGCGCCGGCTTTGGTGGATTGTCATTACTGA 960 0.4667 MEAAEELASGSKEQTHIVKGKRTKRVRPQSPVPFSITGNSPNHGHGEAQDDSNNGGEDDKSSPATTTRHRHSTEEEEDMANCLILLAQGQSRESPKPAVGDDGMNYTKYSSRRFMEAASLGSGKAGFYVYECRTCNKTFPSFQALGGHRTSHKKPKAMAAFTAAIDNDKKQLLFMSDEDEFQFKNNNSGNPFSLQLNRGNLCSNKPKVHECSVCGAEFTSGQALGGHMRRHRTPIGTNTMLSLIPMALEPEEQQQPRKRRNVLSLDLDLNLPAPEDDQTESKFSFASKQQEQHKQQQKQHQQHQASLVFTAPALVDCHY 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02758 319 Coils Coil 286 306 - -
Bach8g02758 319 ProSiteProfiles Zinc finger C2H2 type domain profile. 209 231 IPR013087 -
Bach8g02758 319 PANTHER ZINC FINGER PROTEIN ZAT5 59 297 - -
Bach8g02758 319 Pfam C2H2-type zinc finger 208 233 - -
Bach8g02758 319 Pfam C2H2-type zinc finger 129 155 - -
Bach8g02758 319 MobiDBLite consensus disorder prediction 50 77 - -
Bach8g02758 319 ProSitePatterns Zinc finger C2H2 type domain signature. 211 231 IPR013087 -
Bach8g02758 319 ProSitePatterns Zinc finger C2H2 type domain signature. 132 152 IPR013087 -
Bach8g02758 319 MobiDBLite consensus disorder prediction 270 304 - -
Bach8g02758 319 MobiDBLite consensus disorder prediction 30 49 - -
Bach8g02758 319 SMART c2h2final6 130 152 IPR013087 -
Bach8g02758 319 SMART c2h2final6 209 231 IPR013087 -
Bach8g02758 319 ProSiteProfiles Zinc finger C2H2 type domain profile. 130 157 IPR013087 -
Bach8g02758 319 Gene3D Classic Zinc Finger 127 231 - -
Bach8g02758 319 MobiDBLite consensus disorder prediction 1 77 - -
Bach8g02758 319 SUPERFAMILY beta-beta-alpha zinc fingers 129 231 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02758 Bach-Chr8 34265394 34266353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02758 1 319 C2H2 Transcription Factor Family AT5G04390 44.800 7.69e-84 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach8g02758 zf-C2H2_6 8e-13 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02758 - - lja:Lj5g3v1698890.1 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g02758 8 34265394 34266353 Bach1g02473 1 36124160 36124945 BWGD
Bach8g02758 8 34265394 34266353 Bach9g00243 9 1761613 1762701 ECH
Bach8g02758 8 34265394 34266353 Bach8g02758 8 34265394 34266353 ECH
Bach1g02473 1 36124160 36124945 Bach8g02758 8 34265394 34266353 ECH
Bach13g01235 13 16687179 16688249 Bach8g02758 8 34265394 34266353 ECH
Bach8g02758 8 34265394 34266353 Bach13g01235 13 16687179 16688249 ECH