Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02754 ATGCTTCCTATCAGCTGCATTCTCTTCATATGCCTCTTGGGCTCTTTCTCTTCCATTATCAATGCTGCTTTCAATCTCAGCTTGCCCCACCAACATCCTTACCCTGAAGCTGTGGTTCATGAAGTTCAAAGCACAATAAATGCATCTCTGTCCAGAAGAGAACTACTATCCACTACCGAGCATGACCAAGCTTCTTGCCTCACGGGTAACCCCGTCGACGATTGCTGGCGGTGCGACTCCAACTGGGGCGCAAACCGGCAGAAGCTCGCCGACTGCGGCATTGGGTTCGGCCGCGACGCCATGGGCGGGAAGGGTGGCCAGATCTACATCGTCACCGACTCCTCCGATTCCGACCCAGCAAACCCCCGTCCGGGCACTCTCCGTCACGCCGTGATCCAAGACGAGCCCCTGTGGATCGTGTTCTCCGCCGACATGACCATAAACCTCAAGCACGAGCTCATCTTCAACAGCTACAAAACAGTCGACGGCCGTGGCGCGAACGTGCACATCACCGGGCACGGCTGCATCACACTGCAATACGTATCCAACATCATCATCCAAAACATTCACATCCACCATTGCAAGCCGTCGGGCAACACTAACATTCGGTCAAGTCCAACGCACGTAGGGTGGAGGGGGAGATCCGACGGTGATGGGATATCCATCTTCGGTTCAAGAAAGATATGGATCGACCATTGTTCGCTGTCTTACTGCACGGACGGTCTGATTGATGCGGTGATGGGGTCCACAGGGATTACTATAACGAACAACCATTTCGCGCATCACGACGAGGTGATGCTGTTGGGTCACGACGACGGGTACTTGCCAGATTCAGGGATGCAGGTGACCATTGCGTTTAACCACTTCGGTGAGGGTCTGGTGCAGCGTATGCCTCGGTGCAGACGCGGGTATATACACGTGGTCAACAATGATTTCACGCAGTGGGAGATGTACGCTATCGGCGGTAGTGGTAACCCCACCATAAACAGTCAGGGCAACCGCTACACGGCGCCGTCCGACCCCAGCGCCAAAGAGGTGACGAAGCGCGTGGACACAAACGATAAGGATTGGGCAGGTTGGAATTGGAGGACAGATGGGGATGTAATGGTGAATGGAGCATTCTTTGTGCCATCAGGGGCTGGACTGAGCGCGGTGTATGCTAAGGCGTCTAGTGTGTCACCAAAGTCCGCCGTTCAAATCAACCAGCTCACCATGTACTCCGGTGTCTTTGGTGATCCCAGGGATAACGGGGATATATATCCCGGGTTCAAAGGCGGTGGGTCTGTGACCGGCGCCACCGGAAACAGCGGCAATGGGGGGTCCAGTGACAATGGGGACTTGTACGGAATGATTTTCGGAGAGACAATGGAAGAGGAGGGGAGACAAGATAGGATATGGGATGGGTGA 1407 0.5466 MLPISCILFICLLGSFSSIINAAFNLSLPHQHPYPEAVVHEVQSTINASLSRRELLSTTEHDQASCLTGNPVDDCWRCDSNWGANRQKLADCGIGFGRDAMGGKGGQIYIVTDSSDSDPANPRPGTLRHAVIQDEPLWIVFSADMTINLKHELIFNSYKTVDGRGANVHITGHGCITLQYVSNIIIQNIHIHHCKPSGNTNIRSSPTHVGWRGRSDGDGISIFGSRKIWIDHCSLSYCTDGLIDAVMGSTGITITNNHFAHHDEVMLLGHDDGYLPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPSDPSAKEVTKRVDTNDKDWAGWNWRTDGDVMVNGAFFVPSGAGLSAVYAKASSVSPKSAVQINQLTMYSGVFGDPRDNGDIYPGFKGGGSVTGATGNSGNGGSSDNGDLYGMIFGETMEEEGRQDRIWDG 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02754 468 PRINTS Pollen allergen Amb family signature 318 337 IPR018082 -
Bach8g02754 468 PRINTS Pollen allergen Amb family signature 216 237 IPR018082 -
Bach8g02754 468 PRINTS Pollen allergen Amb family signature 92 109 IPR018082 -
Bach8g02754 468 PRINTS Pollen allergen Amb family signature 116 141 IPR018082 -
Bach8g02754 468 PRINTS Pollen allergen Amb family signature 152 168 IPR018082 -
Bach8g02754 468 PRINTS Pollen allergen Amb family signature 389 412 IPR018082 -
Bach8g02754 468 PRINTS Pollen allergen Amb family signature 360 384 IPR018082 -
Bach8g02754 468 PRINTS Pollen allergen Amb family signature 296 315 IPR018082 -
Bach8g02754 468 SMART amb_all 144 341 IPR002022 -
Bach8g02754 468 PANTHER PECTATE LYASE 18-RELATED 32 410 IPR045032 GO:0030570
Bach8g02754 468 FunFam Pectate lyase 69 411 - -
Bach8g02754 468 Gene3D - 69 411 IPR012334 -
Bach8g02754 468 Pfam Pectate lyase 151 333 IPR002022 -
Bach8g02754 468 SUPERFAMILY Pectin lyase-like 59 390 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02754 Bach-Chr8 34213196 34218862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02754 1 446 Polysaccharide Lyase AT3G53190 67.706 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02754 K01728 - gmx:100808438 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g02754 8 34213196 34218862 Bach1g02478 1 36167257 36170212 BWGD
Bach8g02754 8 34213196 34218862 Bach8g02754 8 34213196 34218862 ECH