LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach8g02714	ATGTGCCTGCAAACGGTGGCGCATCAACGGGGTTCAAGCGAGTTCGGCAGGTTCACGGCGCAGCATGGGACCACAAGCGGCGGCGATGAAGAAGACATACAAGGCCATGATGGCAGCTCAGGGATAGCGCCGTCACTGGGATTCGATCAACCTTTGCAGCAAGGTGAGGTGATGACAATGGCAGAACCTGTTTTTCCAGAGTATAGCAGAGAGATGACAGCTATGGTTTCTGCACTTACGCGTGTTGTCTCAGGCTCTGGCCAGAGGGACAAAAAATGGGTCCAAGGAAGCGGTTTTCCCATGACGTCAAGCTTTGGCCATGATTCTTCTCCTCGTTTGTCTTCTTATTCCCCCAATTCAGACTCTGTTTTGGTCCCAACCTCTGCTTCTGGTTCTTGGATTGGTCAGAAAAGAGGCCGTGAAGAAGAAACTGAGGCTTCTCAGCTCACAGAACCAGCTCCTAGACTCTATAGAGCCATTGGTGACTTCCGAGTGCCTCAACAGAGAGAATCTTCATCAGTTACAGAACAATCTACAACTATTGCCGCCGCCACCGCCGCTGGCGGACCTCTGAATCCGTCGAGTGAAAATGGTTCATATGAAGAAACTGGTGAGAGGAGGAGAAGATACAGAGGAGTGAGGCAGAGGCCATGGGGAAAATGGGCAGCAGAAATTCGTGATCCTCACAAAGCAGCTAGAGTTTGGCTTGGCACGTTTGACACAGCTGAGGCAGCAGCGAGAGCTTACGATGAAGCCGCATTGAGGTTTAGAGGTAACAGAGCAAAACTAAATTTCCCAGAAAATGTTACAATAGTACCACAAGTTCAAAATTTTCCGACAACCCGGTTGGCGATTTCGGATTCTCCGGTGGCCCATTTGCTGCCAACGCCAACGCCGCAGCCGCCATTTCCTTCAGCATTCATGCAAGCACAAGCTTTACAGGGAAACTCTGATTTGATCAGAGACTACTGGGAATACTCTCAGTTGCTGCGGAGCTCAAGTGACTTCCATGTCCGCCCACAAATACAACAACAACAGCAACACCAGCAACCTTCGAGTCTGCTAGAGCAATGGTTCTATAATTCACAATTGGCTGCACTTCAATCATCTTCATTGTTGTCATCATCACCTTTGTCTTCTTCATCATTTTCACCTTCAACTCAAATTTCCTCTACTTCATTCCCTCTGCTTTCTAGTCAGCAAATGGGTGTTTTCCGGCCACCGTGGAACCAGAGTCAGAGTACAGATGGATCAGATTTTCTGCCTTCAACTTGGTCAAATACCGGTGGCGATCTTCCACCATCTGGTTGA	1311	0.4897	MCLQTVAHQRGSSEFGRFTAQHGTTSGGDEEDIQGHDGSSGIAPSLGFDQPLQQGEVMTMAEPVFPEYSREMTAMVSALTRVVSGSGQRDKKWVQGSGFPMTSSFGHDSSPRLSSYSPNSDSVLVPTSASGSWIGQKRGREEETEASQLTEPAPRLYRAIGDFRVPQQRESSSVTEQSTTIAAATAAGGPLNPSSENGSYEETGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVTIVPQVQNFPTTRLAISDSPVAHLLPTPTPQPPFPSAFMQAQALQGNSDLIRDYWEYSQLLRSSSDFHVRPQIQQQQQHQQPSSLLEQWFYNSQLAALQSSSLLSSSPLSSSSFSPSTQISSTSFPLLSSQQMGVFRPPWNQSQSTDGSDFLPSTWSNTGGDLPPSG	436

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach8g02714	436	Gene3D	AP2/ERF domain	208	268	IPR036955	GO:0003700\|GO:0006355
	Bach8g02714	436	PRINTS	Ethylene responsive element binding protein signature	232	248	IPR001471	GO:0003700\|GO:0006355
	Bach8g02714	436	PRINTS	Ethylene responsive element binding protein signature	210	221	IPR001471	GO:0003700\|GO:0006355
	Bach8g02714	436	MobiDBLite	consensus disorder prediction	184	199	-	-
	Bach8g02714	436	PANTHER	DNA-BINDING DOMAIN	173	365	IPR044808	GO:0003700\|GO:0009873
	Bach8g02714	436	SMART	rav1_2	209	272	IPR001471	GO:0003700\|GO:0006355
	Bach8g02714	436	MobiDBLite	consensus disorder prediction	12	49	-	-
	Bach8g02714	436	CDD	AP2	217	268	IPR001471	GO:0003700\|GO:0006355
	Bach8g02714	436	ProSiteProfiles	AP2/ERF domain profile.	209	266	IPR001471	GO:0003700\|GO:0006355
	Bach8g02714	436	MobiDBLite	consensus disorder prediction	97	134	-	-
	Bach8g02714	436	FunFam	Ethylene-responsive transcription factor 2	208	267	-	-
	Bach8g02714	436	MobiDBLite	consensus disorder prediction	86	150	-	-
	Bach8g02714	436	Pfam	AP2 domain	209	258	IPR001471	GO:0003700\|GO:0006355
	Bach8g02714	436	MobiDBLite	consensus disorder prediction	404	436	-	-
	Bach8g02714	436	MobiDBLite	consensus disorder prediction	12	28	-	-
	Bach8g02714	436	MobiDBLite	consensus disorder prediction	184	208	-	-
	Bach8g02714	436	SUPERFAMILY	DNA-binding domain	209	267	IPR016177	GO:0003677

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach8g02714	Bach-Chr8	33867690	33869332	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach8g02714	171	280	AP2-EREBP Transcription Factor Family	AT2G33710	53.913	4.58e-34	125

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2/ERF-ERF	Bach8g02714		AP2	8.8e-15	CL0081

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach8g02714	-		-	qsa:O6P43_004169	374.015