Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02702 GAAATTTTCATTTTTGCTGCAGTTACAGCCTTACAGCGTCTCCTCCCCAAATCAGAAACATTTGTTTCTTACGAGATTAATTCTGCATATACCACTGTCAGGGGATGTTGAATTACGATATTTTAATTCTTGACTGGTAGCCGGTTTTGGCTGGATTTTGGGTTGTTGGTTTTGGTATCAGAAGCAGAAGGGAATATCTTGAAGGTAGAATTTTTATTCTTCCATGGCTGCTTCAACTGAAAGGTGGATTGACCGTCTTCAATTCTCTTCATTGTTTTGGCCTCCCCCACAAGATGCTCAACAAAGAAAGGATCAAATTGCTGTCTATGTTGAGTACTTTTGTCAGTTTACTTCAGAACAATTTCCAGATGATATTACTGAGTTGATCCGTAACAGTTATCCATCAGAAGAAATGCGCCTCTTTGATGATGTTTTGGCAACTTTTGTCCTTCATCATCCGGAGCACGGGCATGCAGTTGTACTTCCAATTATTTCATGTATTATAGATGGCACACTAGTCTATGATAAGACGAATCCTCCCTTTGCTTCTTTCATATCCTTAGTCTACCCAAAAACTGAGAATGAATACTCAGAGCAATGGGCTCTGGCATGTGGGGAAATTTTGCGCATTTTAACTCATTACAATCGCCCTATATACAAAGTGAACAAACAATGTAGTGAAACAGAAAGAAGCAGCAGTGGCAGTCGTGCAACAACAAGTGACTCTGTTGATGGAAAATCTGGCAATAATCCGTCAATGCATCAGGAGAAGAGACCTATAAGGCATTTGTCTCCCTGGATTACTGATATACTATTGGCTGCACCGCTGGGCATTAGAAGTGACTATTTTCGGTGGTGTAGTGGTGTTATGGGTAAATATGCTGCTGGAGAACTCAAGCCACCTACAACTTCTTCTTCTCGTGGGTCTGGAAAGCATCCTCAGCTCATGCCTGCAACTCCAAGGTGGGCTGTTGCCAATGGTGCTGGTGTTATATTAAGTGTTTGTGATGATGAAGTTGCTCGCTATGAGACTGCTACTTTAACAGCAGCTGCTGTCCCTGCACTTCTGCTTCCTCCTCCAACAACAGCTTTGGATGAGCATCTAGTTGCTGGATTACCAGCTCTTGAACCATATGCACGTTTGTTTCACAGATATTATGCTCTTGCTACTCCAAGTGCCACACAGAGACTTCTTCTTGGACTTCTAGAAGCACCTCCATCATGGGCTCCAGATGCACTTGATGCTGCTGTGCAGCTTGTGGAACTACTTCGAGCTGCTGAAGACTATGCATCTGGCATAAGGCTTCCTAGAAATTGGATGCATTTGCATTTCTTGCGTGCAATAGGCACTGCAATGTCCATGAGAGCTGGCATAGCTGCTGATGCTGCAGCTGCATTGCTTTTCCGCGTACTTTCACAACCCGCACTACTTTTTCCTCCACTTAGGCAAGTTGATGGAGTTGAAGTTCAGCATGAACCTTTGGGTGATTACATTTCATCCTACAGAAAACAGATAGAAGTGCCTGCAGCTGAAGCTACCATTGAGGCTACTGCCCAAGGCATTGCCTCAATGCTTTGTGCTCATGGTCCTGAGGTTGAATGGAGAATTTGTACAATTTGGGAAGCTGCTTATGGCCTTATTCCTCTAAGTTCCTCAGTTGTTGATCTTCCAGAAATCATAGTTGCAACCCCATTGCAACCTCCCATACTATCATGGAATTTGTACATACCTCTACTTAAGGTTCTGGAATATCTTCCTCGTGGAAGTCCATCTGAAGCATGTCTCGTGAAAATATTTGTTGCTACAGTGGAAGCCATTCTTCAAAGAACATTTCCACCTGAGTCCACTAGAGAACAAAACAGGAAAGCAAGATACCTCTCTGGCATGGGGTCTGCCTCCAAAAACCTTGCCGTGGCAGAGCTTCGTACTATGGTTCATTCACTCTTCTTAGAATCGTGTGCCTCTGTAGAGCTTGCTTCACGCTTACTTTTTGTTGTCTTAACTGTCTGTGTTAGTCATGAAGCCCAATTCAATGGAAGCAAGAAACCAAGAGGAGAAGTTAGTCGTTCAGCTGAGGAAATCATAGAGGACTTGCAAGCAATCTCTGAAAGCCGGAAAGAATCAAAAAATAGAACAAAGAAGCAAGGGCCTGTTGCAGCATTTGATTCTTATGTTCTGGCTGCTGTTTGTGCTCTTGCCTGTGAGCTTCAGTTATTCCCTTTGGTTACCCGAGGAAATAATCATTCAACCTCCAATAATGTAAGAGATACGGGCAAGCCATACTCACATGTTAAAATAAATGGTTCATCACATGAGTTGCGAAATGGTTTAAATTCAGCAATATGCCATACCCACAGAATTTTAGCAATTTTAGAGGCACTATTTTCTTTGAAGCCATCTACAGTTGGCACCTCATGGAGTTATAGCTCAAATGAGATAGTTGCAGCGGCTATGGTTGCTGCCCATGTTTCTGAACTATTTAGGCGGTCTAAAGCTTGCATGCATGCCCTCTCTATTTTGATGCGTTGTAAATGGGATGATGAAATTCACTCCAGGGCATCATCGCTGTACAATCTCATAGATATTCACAGCAAAACTGTTGCATCCATTGTTAACAAGGCAGAGCCACTGGAAGCAAACTTGATTCGTGCACCTATTTGGAAAGATTCTCTTGTTTGTTTTGATGGTAAAAGACAAAATCAGTGTGTAAATGGTAGCTGCTTAGATCCTGGGGAGGCGTCTGTCTCACATTCTGAAGATTCAGGCCATGCAGAAGCTAATGATAGATCTGAGAACACTTATTCAAATGAAACATCCGGATGTACTTTGGGTAAAGGTATCACAAGTTTCCCACTTGATGCTTCTGATCTAGCCAACTTCCTCACAAAGGACAGGCATATAGGATTTAGTTGCAGTATACAAATGTTTCTGACAGCCATGCTGGCAGAGAAACAAGAGTTATGTTTCTTTGTTGTTTCACTGCTATGGCACAAGTTGATTGCATCTCCTGAAACTCAACCTTGTGCAGAAAGCACTTCTGCTCAACAGGGATGGAGACAGGTGGTTGATGCATTATGCAATGTTGTATCAGCATCACCAACAAAAGCAGCTACAGCAGTTGTACTACAGGCGGAGCGAGAATTGCAACCTTGGATTGCCAAAGATGATGATCTAGGTCAGAAGATGTGGAGAGTCAATCAGCGGATTGTTAAGTTGATAGTGGAACTAATGAGAAATCATGACAGTATAGAATCATTGGTTATTGTGGCAACTGCATCAGATTTACTACTACGAGCTACAGACGGAATGTTGGTTGATGGAGAAGCTTGCACTTTACCACAGCTTGAGCTCTTGGAAGCAACAGCAAGAGCATTTCAGCCAGTGCTGGATTTGGGAGAATCTGGATTAGCAGTGGCAGATGGCCTTTCAAACTTGTTAAAGTGTCGCCTACCAGCTACAGTCAGGTGCCTCTCTCATCCAAGTGCACATGTACGTGCTCTTAGCACATCAGTTCTCCGTGACATTCTGCATACTGGTTCAATCAGATCAAGCGCTAAATTGCCTCGAAAAAACAGCATCCACAACCCCTCTTATCAATTCTTCAACATAGATGTCCTTGACTGGCAAGCTGACATAGAAAAATGCTTGAAATGGGAAGCTCACAGCAGACTTTCAAATGGAATGTCCATAGAAAACCCTAAAATTTCAGATCCTAGAAGGTTAAGGGCTTCGGCGGTAATCGGCTTCTACGCTGTAAACAATTTCTCCGCTTCAAAAATGTCGGTGGTGGCAAACGAAGACTTCCAGCATATTCTGCGTGTGCTGAACACCAACGTTGATGGGAAGCAGAAGATTATGTTCGCCCTTACCTCAATCAAAGGTATTGGCAGGCGGTTCGCCAACATTGTCTGCAAAAAAGCCGATGTCGACATGAACAAAAGAGCTGGTGAATTGAGTGCTGCCGAGCTGGATAACCTCATGACTGTGGTTGCCAACCCTCGTCAGTTTAAGATCCCAGACTGGTTTTTGAACAGAAAGAAGGATTACAAGGATGGTAAATATTCCCAGGTGGTCTCCAATGCTCTGGACATGAAGCTCAGGGATGATTTGGAGCGATTGAAGAAAATTAGAAACCACCGTGGTTTGAGGCACTACTGGGGCCTTCGTGTTCGTGGCCAGCACACCAAGACTACTGGCCGTAGGGGAAAGACTGTTGGTGTGTCTAAGAAGCGTTGAGCTCTTATTTTTCTGGTTTGAAGAATAGGGATATTATTGGGAAAGCATTGAAGTATGTTAGACATGTTTTCACATTACAGATCTTGTACTGTGACTGGTTGTTAAGTGCTGTGACAATTTCATTTTTGT 4366 0.4322 MAASTERWIDRLQFSSLFWPPPQDAQQRKDQIAVYVEYFCQFTSEQFPDDITELIRNSYPSEEMRLFDDVLATFVLHHPEHGHAVVLPIISCIIDGTLVYDKTNPPFASFISLVYPKTENEYSEQWALACGEILRILTHYNRPIYKVNKQCSETERSSSGSRATTSDSVDGKSGNNPSMHQEKRPIRHLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELKPPTTSSSRGSGKHPQLMPATPRWAVANGAGVILSVCDDEVARYETATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYALATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEDYASGIRLPRNWMHLHFLRAIGTAMSMRAGIAADAAAALLFRVLSQPALLFPPLRQVDGVEVQHEPLGDYISSYRKQIEVPAAEATIEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLSSSVVDLPEIIVATPLQPPILSWNLYIPLLKVLEYLPRGSPSEACLVKIFVATVEAILQRTFPPESTREQNRKARYLSGMGSASKNLAVAELRTMVHSLFLESCASVELASRLLFVVLTVCVSHEAQFNGSKKPRGEVSRSAEEIIEDLQAISESRKESKNRTKKQGPVAAFDSYVLAAVCALACELQLFPLVTRGNNHSTSNNVRDTGKPYSHVKINGSSHELRNGLNSAICHTHRILAILEALFSLKPSTVGTSWSYSSNEIVAAAMVAAHVSELFRRSKACMHALSILMRCKWDDEIHSRASSLYNLIDIHSKTVASIVNKAEPLEANLIRAPIWKDSLVCFDGKRQNQCVNGSCLDPGEASVSHSEDSGHAEANDRSENTYSNETSGCTLGKGITSFPLDASDLANFLTKDRHIGFSCSIQMFLTAMLAEKQELCFFVVSLLWHKLIASPETQPCAESTSAQQGWRQVVDALCNVVSASPTKAATAVVLQAERELQPWIAKDDDLGQKMWRVNQRIVKLIVELMRNHDSIESLVIVATASDLLLRATDGMLVDGEACTLPQLELLEATARAFQPVLDLGESGLAVADGLSNLLKCRLPATVRCLSHPSAHVRALSTSVLRDILHTGSIRSSAKLPRKNSIHNPSYQFFNIDVLDWQADIEKCLKWEAHSRLSNGMSIENPKISDPRRLRASAVIGFYAVNNFSASKMSVVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELDNLMTVVANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 1337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02702 1337 PRINTS Protein GIGANTEA signature 301 321 IPR026211 GO:2000028
Bach8g02702 1337 PRINTS Protein GIGANTEA signature 4 22 IPR026211 GO:2000028
Bach8g02702 1337 PRINTS Protein GIGANTEA signature 377 399 IPR026211 GO:2000028
Bach8g02702 1337 PRINTS Protein GIGANTEA signature 232 250 IPR026211 GO:2000028
Bach8g02702 1337 PRINTS Protein GIGANTEA signature 122 146 IPR026211 GO:2000028
Bach8g02702 1337 PRINTS Protein GIGANTEA signature 509 530 IPR026211 GO:2000028
Bach8g02702 1337 PRINTS Protein GIGANTEA signature 250 271 IPR026211 GO:2000028
Bach8g02702 1337 PRINTS Protein GIGANTEA signature 277 295 IPR026211 GO:2000028
Bach8g02702 1337 PRINTS Protein GIGANTEA signature 203 221 IPR026211 GO:2000028
Bach8g02702 1337 PRINTS Protein GIGANTEA signature 326 345 IPR026211 GO:2000028
Bach8g02702 1337 PRINTS Protein GIGANTEA signature 183 203 IPR026211 GO:2000028
Bach8g02702 1337 PRINTS Protein GIGANTEA signature 345 365 IPR026211 GO:2000028
Bach8g02702 1337 PRINTS Protein GIGANTEA signature 449 472 IPR026211 GO:2000028
Bach8g02702 1337 Gene3D - 1186 1265 - -
Bach8g02702 1337 Gene3D 30s ribosomal protein s13, domain 2 1277 1327 IPR027437 -
Bach8g02702 1337 Pfam Ribosomal protein S13/S18 1199 1327 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bach8g02702 1337 MobiDBLite consensus disorder prediction 151 180 - -
Bach8g02702 1337 Coils Coil 617 637 - -
Bach8g02702 1337 ProSiteProfiles Ribosomal protein S13 family profile. 1200 1330 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bach8g02702 1337 MobiDBLite consensus disorder prediction 151 184 - -
Bach8g02702 1337 SUPERFAMILY S13-like H2TH domain 1198 1337 IPR010979 GO:0003676
Bach8g02702 1337 PANTHER PROTEIN GIGANTEA 1 1157 IPR026211 GO:2000028
Bach8g02702 1337 FunFam 40S ribosomal protein S18 1186 1265 - -
Bach8g02702 1337 MobiDBLite consensus disorder prediction 840 862 - -
Bach8g02702 1337 ProSitePatterns Ribosomal protein S13 signature. 1306 1319 IPR018269 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bach8g02702 1337 Hamap 30S ribosomal protein S13 [rpsM]. 1197 1337 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bach8g02702 1337 FunFam 40S ribosomal protein S18 1277 1328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02702 Bach-Chr8 33738954 33751373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02702 1186 1337 Cytoplasmic Ribosomal Protein Gene Family AT4G09800 96.053 1.75e-101 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02702 K12124 - gmx:100779044 1901.33