Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02692 ATGAGAGGAAGAGCTAGAGCACTTGCTAAACTTTCTTACTCTCTATACTCTCCAGTTAAACGACACCCAATTACAGAACTAGCATCCTCCATTTCTGGTTTTCAAGCTATTAGTCCTCTTTCAACCTCCACCTCTTCCACGACTACCACTGTTGAAGGGCAAAACAAGAAGTCATCAAAGTCCCAAAGGGATGAACTGCTTCTAGAAAAGTTCAGACTTAGAAAGCTAAAAGGTTCTTCTGAATCTGTACAGGGAAACCCCCAAGCATCATCAAATTCTGCTGCAGAGAAGGTGATTGAAAAGGGTTTGCAGAATGAGGATGAACCCACTCAGCAAGTTACCAAATTTAAGGACTTGGGTCTAAGTCAGGAGCTTATTCTGGGTTTGAAAACCGTTGGTGTTCTTCCTCCAAGTGAGATTCAATGTGTGGGAATTCCAGCTATGTTGGATGGCAAGAATGTCTTGTTGAGTTCACAATCTGGGTCTTCTAGGACTTTGGCCTACTTGTTGCCTCTTATTCAGCTGCTGAGACGGGATGCAAAACTTGATAGTTCAAAGTCTCAGCAACCCCGAGCCATTCTGCTTTGTGCCTCAGAGGAGAAAGCTGAAGAGTGCTTTAATGTTGCAAAACTTATCATCCATAATGCAGAAGTGAAGTCAACAAAAGATGGCACTTTGCCAAAGAATGAGTTGTCAAACATCTCAATTGGCCTAGTAATTGGAACCCCTAGTGAAATTCTTTGTTACATTGAAGAGGGGACTGTCATTCCTGATGAAATAAGATACTTGGTGTTGGATGAGGCAGACTGCATGTTTCAGAGTGGTCTTGGTCCTCAAATTCACAAGATCATAAGACCTTTAAACAATCGTACTTCAGAATCAACTTCCAAAGGATTGCAAACTGTTTTGGTCACTTCAACAATTTCAGAGATTTTGGGTGCAGAGTCTTCAGTTGTCAAGCACCTTGAGCATGATCATGGAGGACAAATTTCTGCAATGGTGTTAGAGATGGATCAAACAGAAGTGTTTCATATCACTGAGTCCTTGGATGCTCTAAGGAAAAAAGTGGCTGAGGCAATGGATTCCTTATGTGTTGACTGATGACTGATAAATTTTG 1117 0.4163 MRGRARALAKLSYSLYSPVKRHPITELASSISGFQAISPLSTSTSSTTTTVEGQNKKSSKSQRDELLLEKFRLRKLKGSSESVQGNPQASSNSAAEKVIEKGLQNEDEPTQQVTKFKDLGLSQELILGLKTVGVLPPSEIQCVGIPAMLDGKNVLLSSQSGSSRTLAYLLPLIQLLRRDAKLDSSKSQQPRAILLCASEEKAEECFNVAKLIIHNAEVKSTKDGTLPKNELSNISIGLVIGTPSEILCYIEEGTVIPDEIRYLVLDEADCMFQSGLGPQIHKIIRPLNNRTSESTSKGLQTVLVTSTISEILGAESSVVKHLEHDHGGQISAMVLEMDQTEVFHITESLDALRKKVAEAMDSLCVD 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02692 366 MobiDBLite consensus disorder prediction 77 96 - -
Bach8g02692 366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 311 IPR027417 -
Bach8g02692 366 SUPERFAMILY PABC (PABP) domain 318 361 IPR036053 GO:0003723
Bach8g02692 366 SMART poly_2 311 366 IPR002004 GO:0003723
Bach8g02692 366 SMART ultradead3 133 340 IPR014001 -
Bach8g02692 366 MobiDBLite consensus disorder prediction 79 96 - -
Bach8g02692 366 Gene3D - 318 364 - -
Bach8g02692 366 Pfam DEAD/DEAH box helicase 139 309 IPR011545 GO:0003676|GO:0005524
Bach8g02692 366 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 280 366 IPR002004 GO:0003723
Bach8g02692 366 Gene3D - 76 317 IPR027417 -
Bach8g02692 366 MobiDBLite consensus disorder prediction 38 56 - -
Bach8g02692 366 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 145 326 IPR014001 -
Bach8g02692 366 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 42 310 - -
Bach8g02692 366 Pfam Poly-adenylate binding protein, unique domain 319 361 IPR002004 GO:0003723
Bach8g02692 366 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 114 142 IPR014014 GO:0003724
Bach8g02692 366 MobiDBLite consensus disorder prediction 38 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02692 Bach-Chr8 33646657 33648979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02692 116 287 Eukaryotic Initiation Factors Gene Family AT3G13920 28.409 4.21e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02692 - - qsa:O6P43_004140 415.231