Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02691 ATGGCAATCTCTTCACCGATGGCTCAGCCTGCTGCGCCGGTGGTTCCGGCGGCGGGAATGCCCGCAGGAGCATATGCAACTGCGTCGTTGTATGTTGGCGATCTTGATGCCAATGTGAACGAGGGGCAACTGTATGATCTGTTCAGCCAGGTCGCTCAGGTTGTCTCCATTAGGGTTTGCAGGGATCAGACTAGACGATCCTCCCTCGGTTACGGTTATGTCAATATTGCCACCGCTCAAGAGGCTTCTAATGCCATGGAAGTTCTGAACTTTACTCCTCTAAATGGGAAACCCATTCGTATTATGTTTTCTCATCGAGATCCTAGCGTCCGGAAAAGTGGATATGCTAATGTTTTCATCAAGAACCTAGACACATCAATAGACAACAAGGCATTGCATGATACTTTTGCTTCCTTTGGCACTGTACTTTCCTGCAAGATAGCTGTTGATAGCAATGGTCAGTCAAAAGGGTATGGTTTTGTACAGTTTGACAATGAAGAATCTGCACAAAATGCTATCAAACAGTTGAATGGCATGCTTTTAAATGATAAACAAGTTTATGTTGGACGCTTTGTTCGAAGCCAGGAAAGGGCTAGATCAGATGGATCACCAAAGTTCACTAATGTGTATGTGAAAAATTTTTCTGATACAGTGACTGATGCAGACCTTAAGAAACTTTTTGCCCCATATGGTACAGTAACTAGTGCTGTTGTCATGAAAGATGCAAATGGGAACTCTAGATGTTTTGGTTTTGTGAATTTCCAGAGCCCAGATTCAGCAGCTTCTGCTGTTGAGAAGGTAAATGGAACTACTGTTAACGATGACAAGGTTTTATTTGTTGGAAGAGCTCAGAGGAAATCTGAGAGAGAGGCAGAGTTGAAAGCCAAATTTGAGCAGGAAAGAATTGGTAGATATGAGAAAATGCAAGGTGCTAATTTATACCTGAAAAATCTTGATGATAGCGTCAATGATGAAAAGCTCAAGGAGCTATTTTCTGAGTTTGGAACAATAACATCATGTAAGGTCATGCTTGATCCACACGGGCGTAGCAAGGGCTCTGGTTTTGTGGCCTTGTCTACTCCTGAGGAAGCAAGTAAAGCTTTAAATGAAATGAATGGAAAGATGATTGGGAGGAAACCTCTTTATGTTGCCGTGGCCCAGCGTAAAGAAGAGAGGAAGGCTCGCCTGCAGGCACAGTTTGCTCAAATTCGAGCACCCAGTGGAATTGCACCTCTACCTGCAGGAATTCCTGGATTTCATCCAGGGGCGCCTAGGGTTGCTCCTCAACAGTTGTATTTTGGTCAGGGAACACATGGTCTAATGCCACATCAACCTGGAGGGTTTGGTTTTCAGCAGCAACTCTTGCCTGGAATGCGGCCAGGTGTTGCTCCAAATTTCATTATGCCATATCAACTTCAGAGACAGGGTCAACCTGGGCAGAGGATGGGTGTTCGACGGGGTGGAAACCTCCAACAGTTGCAGCAGAACCAGATGCTGCATCGTAACTCCAACCAAGGGTATAATCGATATATGGGTAACGGTCGAAATGGTATGGACTCATCTGTCATTCCCCAAGGTCTAGTGGGTCCTATGATGCCATTGCCCTTTGATGGTTCTGGGGTTACTACACCTCCTATTGATAATCAGCGACCTGGTGGATTGGCCTCAGCTTTGGCTTCTGCTTCCCCAGAAAATCAGCGGATGATGCTGGGTGAACATCTATACCCGCTCGTGGAGCGTCTGGCACCCAACCAGACAGCCAAGGTAACGGGGATGCTGTTGGAAATGGACCAATCTGAGGTGATCCATCTCATTGAATCTCCCGAGGACCTGAAGACAAAGGTGTCTGAGGCAATGCAAGTCCTTCGTGAAGCTGCATCAGGTTCTGATGTTAACGATCAGCTTGGCTCGTTATCACTGAATGAATGAGTTATTCCAATTAGTGGTAAATATATTGCATGGTTTGTATGAGCCAATTATTTTGGGCTCATGAGTTATTGTTTCTTCGAGTCTTTTCCATCTAGGAGATTCTTTTTAGGATCTGACTTTCTTTTTGCGGGATTATTGATTTGAGTTGGCAAGTTAAGGAGGGATTCAAGACCCACTTAGACATTGTTTTGTCTTGTCAGTTGCTTCCATTTAGGATTGAGTTGGAAATTAAGGTTCTAATTTATTTGAGTTGAC 2184 0.4469 MAISSPMAQPAAPVVPAAGMPAGAYATASLYVGDLDANVNEGQLYDLFSQVAQVVSIRVCRDQTRRSSLGYGYVNIATAQEASNAMEVLNFTPLNGKPIRIMFSHRDPSVRKSGYANVFIKNLDTSIDNKALHDTFASFGTVLSCKIAVDSNGQSKGYGFVQFDNEESAQNAIKQLNGMLLNDKQVYVGRFVRSQERARSDGSPKFTNVYVKNFSDTVTDADLKKLFAPYGTVTSAVVMKDANGNSRCFGFVNFQSPDSAASAVEKVNGTTVNDDKVLFVGRAQRKSEREAELKAKFEQERIGRYEKMQGANLYLKNLDDSVNDEKLKELFSEFGTITSCKVMLDPHGRSKGSGFVALSTPEEASKALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPSGIAPLPAGIPGFHPGAPRVAPQQLYFGQGTHGLMPHQPGGFGFQQQLLPGMRPGVAPNFIMPYQLQRQGQPGQRMGVRRGGNLQQLQQNQMLHRNSNQGYNRYMGNGRNGMDSSVIPQGLVGPMMPLPFDGSGVTTPPIDNQRPGGLASALASASPENQRMMLGEHLYPLVERLAPNQTAKVTGMLLEMDQSEVIHLIESPEDLKTKVSEAMQVLREAASGSDVNDQLGSLSLNE 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02691 642 NCBIfam polyadenylate binding protein, human types 1, 2, 3, 4 family 28 623 IPR006515 GO:0003723
Bach8g02691 642 SMART rrm2_1 117 189 IPR003954 GO:0003676
Bach8g02691 642 SMART rrm2_1 312 384 IPR003954 GO:0003676
Bach8g02691 642 SMART rrm2_1 208 280 IPR003954 GO:0003676
Bach8g02691 642 Gene3D - 294 399 IPR012677 -
Bach8g02691 642 FunFam Polyadenylate-binding protein 117 190 - -
Bach8g02691 642 SUPERFAMILY RNA-binding domain, RBD 116 287 IPR035979 GO:0003676
Bach8g02691 642 FunFam Polyadenylate-binding protein 7 111 - -
Bach8g02691 642 Gene3D - 191 293 IPR012677 -
Bach8g02691 642 Gene3D - 549 627 - -
Bach8g02691 642 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 311 388 IPR000504 GO:0003723
Bach8g02691 642 SUPERFAMILY RNA-binding domain, RBD 308 400 IPR035979 GO:0003676
Bach8g02691 642 CDD RRM3_I_PABPs 206 286 - -
Bach8g02691 642 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 28 106 IPR000504 GO:0003723
Bach8g02691 642 CDD RRM2_I_PABPs 114 190 IPR045305 -
Bach8g02691 642 SUPERFAMILY RNA-binding domain, RBD 9 109 IPR035979 GO:0003676
Bach8g02691 642 SMART rrm1_1 208 281 IPR000504 GO:0003723
Bach8g02691 642 SMART rrm1_1 29 102 IPR000504 GO:0003723
Bach8g02691 642 SMART rrm1_1 312 384 IPR000504 GO:0003723
Bach8g02691 642 SMART rrm1_1 117 189 IPR000504 GO:0003723
Bach8g02691 642 FunFam Polyadenylate-binding protein 197 293 - -
Bach8g02691 642 Gene3D - 21 116 IPR012677 -
Bach8g02691 642 SMART poly_2 562 625 IPR002004 GO:0003723
Bach8g02691 642 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 550 627 IPR002004 GO:0003723
Bach8g02691 642 SUPERFAMILY PABC (PABP) domain 500 627 IPR036053 GO:0003723
Bach8g02691 642 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 116 193 IPR000504 GO:0003723
Bach8g02691 642 Gene3D - 117 189 IPR012677 -
Bach8g02691 642 FunFam Polyadenylate-binding protein 547 628 - -
Bach8g02691 642 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 207 285 IPR000504 GO:0003723
Bach8g02691 642 Pfam Poly-adenylate binding protein, unique domain 558 622 IPR002004 GO:0003723
Bach8g02691 642 CDD RRM4_I_PABPs 310 388 - -
Bach8g02691 642 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 118 186 IPR000504 GO:0003723
Bach8g02691 642 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 30 100 IPR000504 GO:0003723
Bach8g02691 642 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 313 381 IPR000504 GO:0003723
Bach8g02691 642 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 209 276 IPR000504 GO:0003723
Bach8g02691 642 PANTHER RNA BINDING PROTEIN 28 90 - -
Bach8g02691 642 FunFam Polyadenylate-binding protein 294 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02691 Bach-Chr8 33632679 33637766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02691 25 636 Eukaryotic Initiation Factors Gene Family AT1G71770 59.905 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02691 K13126 - gmx:100783163 1009.21