Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02668 ATGCCTTTTTGCTGTATACCCGATCAGATGCTGAGTACGGCACCTGATTATTTATTCTTTCATGTTGAAACAGGTGATGCTTTACATAGCCTGAGGGCAAATTTACAGGATCCAAACAATGTTCTGCAAAGTTGGGATCCTACACTTGTCAATCCATGCACATGGTTTCACGTAACATGCAACAATGAGAATAGTGTCATAAGAGTTGATCTAGGAAATGCTGCTTTGTCGGGTCAACTTGTTCCACAGCTTGGCCAGCTCAAGAATTTACAATATTTGGAACTTTACAGCAATAACATTAGTGGCCCAATTCCAAGTGACGTTGGGAATCTTACTAGCTTGGTGAGCTTGGATCTTTACTTGAACAGTTTCACTGGTCCTATCCCAGATACATTGGGCAAGTTATCAAAATTGCGTTTCCTCCGGCTTAACAACAACAGCTTGACGGGTCCTATTCCCATGTCATTGACTAATATAACATCTCTGCAAGTGCTGGATTTATCTAATAATCATCTCTCCGGGGTTGTTCCTGACAATGGCTCCTTCTCCTTATTCACTCCTATCAGTTTTGCCAACAACATGAATCTGTGTGGGCCTGTCACTGGGCACCCATGTCCTGGCTCCCCTCCATTTTCTCCTCCTCCTCCCTTTGTCCCACCACCTCCAATTTCTACCCCAGGAGGTAATAGTGCCACTGGGGCAATTGCTGGTGGAGTTGCTGCTGGTGCTGCTCTGTTATTTGCCGCTCCTGCACTTGCTTTTGCGTGGTGGCGCCGGAGGAAACCTCGGGAATTTTTCTTTGATGTGCCTGCTGAAGAGGATCCTGAAGTACATCTGGGGCAACTTAAGAGGTTCTCACTACGAGAACTGCAAGTTGCGACAGATAGTTTCAGCAATAAGAACATCCTTGGAAGGGGTGGATTTGGTAAGGTATACAAAGGGCGCCTAGCAGATGGTTCATTGGTTGCTGTGAAAAGACTGAAGGAGGAGCGCACACCTGGTGGGGAACTTCAGTTTCAGACTGAAGTAGAGATGATCAGCATGGCTGTGCATCGAAATCTCCTCCGGTTACGTGGGTTCTGTATGACACCAACTGAAAGGCTACTTGTTTATCCCTACATGGCTAATGGAAGTGTTGCATCATGTTTAAGAGAGCGTCCACCACATCAAGAGCCACTGGATTGGCCAACACGGAAGTGTATTGCTTTGGGATCTGCAAGAGGTCTTTCATATCTGCATGATCACTGTGATCCTAAGATTATTCATCGTGATGTGAAAGCTGCAAACATATTGTTGGATGAGGAATTTGAGGCTGTTGTTGGGGATTTTGGGTTGGCAAAACTTATGGATTACAAGGATACCCATGTCACAACTGCTGTGCGGGGTACAATTGGGCACATAGCTCCAGAGTATCTATCAACCGGAAAATCTTCAGAGAAAACTGATGTTTTTGGGTACGGTATCATGCTTCTGGAGCTGATTACTGGACAAAGAGCTTTTGACCTTGCTCGGCTTGCTAATGATGATGACGTCATGTTGCTTGATTGGGTAAAAGGGCTTCTGAAAGAGAAAAAGCTAGAAATGCTGGTTGATCCTGATCTCCAAAACAATTATGTAGAAGCAGAGGTAGAACAGCTAATCCAGGTTGCACTACTCTGCACACAAGGTTCCCCTATGGACCGACCTAAGATGTCAGAGGTGGTGAGAATGCTTGAAGGTGATGGCTTGGCAGAAAGATGGGATGAGTGGCAGAAGGTGGAAGTTCTCCGACAAGAGGTGGAGCTTGCCCCGCATCCGAATTCTGATTGGATCGTAGACTCGACTGAGAATCTACACGCAGTTGAGTTATCTGGTCCAAGGTAGAAAAGTATAAAGAAAAGGAAATATTATGACTTAAATTTTAACTATTGAAAATTTTCTCTTTTTTGGTTCCTTCAAAACCCATATCCCAATTACATCTCTTGTAGGTTCACTGCATTGTATTCATTTAGATTTGTGCATAGGGGGGAGGGGTCACCTTGTCAAGTTGCAATTTGTATCATGTGCTGCATTTTGATGAGGTGATG 2066 0.4463 MPFCCIPDQMLSTAPDYLFFHVETGDALHSLRANLQDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAALSGQLVPQLGQLKNLQYLELYSNNISGPIPSDVGNLTSLVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNNSLTGPIPMSLTNITSLQVLDLSNNHLSGVVPDNGSFSLFTPISFANNMNLCGPVTGHPCPGSPPFSPPPPFVPPPPISTPGGNSATGAIAGGVAAGAALLFAAPALAFAWWRRRKPREFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPHQEPLDWPTRKCIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPHPNSDWIVDSTENLHAVELSGPR 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02668 620 SUPERFAMILY L domain-like 24 193 - -
Bach8g02668 620 SMART serkin_6 297 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g02668 620 Pfam Protein kinase domain 298 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g02668 620 Gene3D Transferase(Phosphotransferase) domain 1 374 591 - -
Bach8g02668 620 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Bach8g02668 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Bach8g02668 620 FunFam Somatic embryogenesis receptor kinase 1 21 207 - -
Bach8g02668 620 FunFam Somatic embryogenesis receptor kinase 1 266 373 - -
Bach8g02668 620 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 23 582 - -
Bach8g02668 620 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Bach8g02668 620 Pfam Leucine Rich Repeat 161 178 IPR001611 GO:0005515
Bach8g02668 620 Gene3D Ribonuclease Inhibitor 23 207 IPR032675 -
Bach8g02668 620 FunFam Somatic embryogenesis receptor-like kinase 1 374 591 - -
Bach8g02668 620 ProSiteProfiles Protein kinase domain profile. 297 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g02668 620 SUPERFAMILY Protein kinase-like (PK-like) 276 572 IPR011009 -
Bach8g02668 620 Gene3D Phosphorylase Kinase; domain 1 266 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02668 Bach-Chr8 33124033 33130077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02668 25 620 Receptor kinase-like Gene Family AT1G71830 90.940 0.0 1034
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bach8g02668 Pkinase 4.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02668 K13418 - gmx:100789884 1087.4