Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02654 ATGGACTGTGAAGAGAACTTATGTGCTAACACCTGGGCTAGGTCTTCATCAACTTGTCCTGGGAATGGATTACAGACAAATTTACCCTCGGATCCTTCTTTTCCAAATTTTAGTTTGCAGCATAATCAACTGAAATGGGAAGATGCCTCTGGTTCTGATTATGGTGTCAGGATTGGAGCACCTTTCAAAGAATTCAACCAACTACCAATCGATTCCAACAATGAGATGAAGATTTCTGATCAAGAAGATTGTCAGATGAGTGATGCATCACAAGCCAGCAAACTCCAAGGTTGGGATCCCAGAATGATGTTGAATAATCTTTCTTTCCTGGAAGAAAAGATTCATCAGCTCCAGGATCTTGTCCATCTGATTGTTGGTCAAAAAGACCAACAATTTGGACAACCTGATGAACTTGCTACTCAGGAACAGCAGCTCATCACGGCTGATCTTACATCAATTATCGTTCAATTGATCTCTACTGCCGGTAGTCTTCTCCCATCTATCAGGCATACCCTTACAACCAGTAGTCCATCTATTGCACAGCTTAGTCAGCTTCATGGTGTTTCCTTTCCTTCTGGATCAGGGCCAAGTAATAGTATTCAGCCACAGCTTAATAGTGGAAAGAAGATGTCTGATCAGTCCAACCAGGTTGATCTGACTAATAATGGTGAAATGGAGAAAAACTACAATATGGAAGAACACGAACATAAAGATGAAGAGGATATGGAGGAGGGCGAGAACCTTCCACCTGGTTCCTACGAGATTTTACAGTTAGAAAAAGAAGAAATTCTTGCACCTCATACCCATTTCTGTACAATTTGTGGGAAGGGATTCAAGAGAGATGCAAACCTTCGGATGCACATGCGAGGCCATGGTGATGAATACAAAACCCCCGAAGCACTTGCTAGACCTAATAAAGAATCTGGGTCTGAACCAAAGCTTATCAAGAGGTATTCCTGCCCCTATGCTGGCTGCAAGCGCAACAAGGATCACAAGAAGTTTCAACCTCTGAAGACTATTCTATGTGTCAAAAACCATTACAAAAGAACACACTGTGACAAGAGTTACACTTGCAGCAGATGCCACACGAAGAAATTCTCGGTCATGGCAGATCTCAAGACTCACGAAAAGCATTGTGGTAGGGACAAATGGCTTTGTTCATGTGGCACAACATTTTCAAGGAAAGACAAGCTTTTCGGACACATTGCTCTGTTCCAAGGCCATACTCCAGCCATTCCCTTAGATGATGCTAAATGGTCAGCTGTACCACCTGATTCAGAAAGCAAAGACAACAGCAATAAGGTAACAAGTCAAAACTTAAGTTTTGGATCAAATCCTTACAGTGGAGATGGTGTCCAGAACATGATGGGTATCAAAGATAACGTTGATGATCCCATGAATTATTTTTCATCATTGAACTTTGATACCTCTAACTTCAGTGGGTTTAATGAATTCCTTCGACCAACTTTTGAGGACTCGGAGGCTTCACTCTCATTTCTCATGCCTGGATCTTTTAACTACAATCCCAAAGCTGGAGCAGAATCAAGTTCTGATAATTTATAG 1563 0.4171 MDCEENLCANTWARSSSTCPGNGLQTNLPSDPSFPNFSLQHNQLKWEDASGSDYGVRIGAPFKEFNQLPIDSNNEMKISDQEDCQMSDASQASKLQGWDPRMMLNNLSFLEEKIHQLQDLVHLIVGQKDQQFGQPDELATQEQQLITADLTSIIVQLISTAGSLLPSIRHTLTTSSPSIAQLSQLHGVSFPSGSGPSNSIQPQLNSGKKMSDQSNQVDLTNNGEMEKNYNMEEHEHKDEEDMEEGENLPPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTPEALARPNKESGSEPKLIKRYSCPYAGCKRNKDHKKFQPLKTILCVKNHYKRTHCDKSYTCSRCHTKKFSVMADLKTHEKHCGRDKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLDDAKWSAVPPDSESKDNSNKVTSQNLSFGSNPYSGDGVQNMMGIKDNVDDPMNYFSSLNFDTSNFSGFNEFLRPTFEDSEASLSFLMPGSFNYNPKAGAESSSDNL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02654 520 MobiDBLite consensus disorder prediction 425 446 - -
Bach8g02654 520 SMART c2h2final6 356 378 IPR013087 -
Bach8g02654 520 SMART c2h2final6 269 291 IPR013087 -
Bach8g02654 520 SMART c2h2final6 318 351 IPR013087 -
Bach8g02654 520 ProSitePatterns Zinc finger C2H2 type domain signature. 271 291 IPR013087 -
Bach8g02654 520 Gene3D Classic Zinc Finger 253 323 - -
Bach8g02654 520 ProSiteProfiles Zinc finger C2H2 type domain profile. 269 296 IPR013087 -
Bach8g02654 520 MobiDBLite consensus disorder prediction 421 446 - -
Bach8g02654 520 SUPERFAMILY beta-beta-alpha zinc fingers 268 293 IPR036236 -
Bach8g02654 520 MobiDBLite consensus disorder prediction 186 215 - -
Bach8g02654 520 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 79 492 IPR044300 GO:0010044|GO:0010447
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02654 Bach-Chr8 32981927 32983489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02654 237 518 C2H2 Transcription Factor Family AT1G34370 69.792 1.64e-140 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach8g02654 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02654 - - pcin:129292903 766.918