Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02648 ATGGGAGATGGAAATGTGAAGCTCCCTCCTGGCTTTCAATTTTGTCCTACAGATGAGGAGCTCGTCCTTCAGTTCCTTTACTCCAGGGCTTATCTTTTGCCATCCCATCCCAATATAATTCCTGATCTTAATCTCTCTCTGCTTCATCCATGGGAATTAAATGATTACATAGTTGAGAGAAGCAAGATGACAAAGACAAACCAGAACATGAGCAGCTTCAACCCTGAAACAAATCAACTGTCCTCGCCTCAAGAACCCATAACCCAAAAGCGATTTCAATGGCCTTCCTTGGCAAAAGTTGCGGAGAACTACCATCCAGCCTTTCCCCAAAAGGTGTTGGCAGAGATAATAGGGACTTATTTATTGGTGTTTGTGGGAAGTGGTTCAGCTGCTCTTAGTGCTATTGATGAAAACAAAGTCTCAAAGCTGGCGGCTTCACTTGCAGGAGGCTTCATTGTGACTGTGATGATCTATTCCATAGGGCATATCTCTGGTGCACACATGAATCCAGCAGTCTCCTTTGCTTTTGCCGCCCTGAGACATTTTCAATGGAAACAGGTCCCATTTTATATAGCAGCTCAAGTGACAGGAGCCATTTCTGCTTCATTTACTCTTCGGATTCTGTTGGACCCAAATAAACAACTTGGTTCAACCACACCTTCTGGAACAAATATCCAAGCTCTAATCATTGAAATAGTGGCAACCTTTACTATGATGTTCATCACCTCTGCTGTGGCCACTGATGCAAAAGCTGTTGGAGAGCTTGCAGGAGTTGCAGTAGGTTCTTCAGTATGCATAGCAGGAATCCTTGCTGGACCAATATCAGGGGGATCAATGAACCCAGCAAGGACATTAGGTCCTGCAATTGCTAGTGGATCCTACAAGGGAATTTGGGTGTATCTGGTTGGACCTGTTACTGGGGCACTTCTAGGGGCATGGTCCTACAGTATGATTCGGGATACAGATAAGCCAGTGTCCAAACTACGCTTCACAAACAGTGAAAATGAACAAGTTGTGAACAAAGACCCTCTCATCTTAGTGTGA 1044 0.4454 MGDGNVKLPPGFQFCPTDEELVLQFLYSRAYLLPSHPNIIPDLNLSLLHPWELNDYIVERSKMTKTNQNMSSFNPETNQLSSPQEPITQKRFQWPSLAKVAENYHPAFPQKVLAEIIGTYLLVFVGSGSAALSAIDENKVSKLAASLAGGFIVTVMIYSIGHISGAHMNPAVSFAFAALRHFQWKQVPFYIAAQVTGAISASFTLRILLDPNKQLGSTTPSGTNIQALIIEIVATFTMMFITSAVATDAKAVGELAGVAVGSSVCIAGILAGPISGGSMNPARTLGPAIASGSYKGIWVYLVGPVTGALLGAWSYSMIRDTDKPVSKLRFTNSENEQVVNKDPLILV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02648 347 Pfam Major intrinsic protein 106 315 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g02648 347 ProSitePatterns MIP family signature. 167 175 IPR022357 -
Bach8g02648 347 Pfam No apical meristem (NAM) protein 9 62 IPR003441 GO:0003677|GO:0006355
Bach8g02648 347 SUPERFAMILY Aquaporin-like 103 324 IPR023271 -
Bach8g02648 347 SUPERFAMILY NAC domain 6 58 IPR036093 GO:0003677|GO:0006355
Bach8g02648 347 PRINTS Major intrinsic protein family signature 230 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g02648 347 PRINTS Major intrinsic protein family signature 110 129 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g02648 347 PRINTS Major intrinsic protein family signature 261 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g02648 347 PRINTS Major intrinsic protein family signature 149 173 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g02648 347 PRINTS Major intrinsic protein family signature 186 205 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g02648 347 PRINTS Major intrinsic protein family signature 298 318 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g02648 347 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
Bach8g02648 347 PANTHER AQUAPORIN NIP2-1 82 327 IPR034294 -
Bach8g02648 347 CDD MIP 110 318 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach8g02648 347 Gene3D Glycerol uptake facilitator protein. 67 326 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02648 Bach-Chr8 32916323 32921925 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02648 110 342 Major Intrinsic Protein MIP AT5G37820 49.573 9.23e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach8g02648 MIP 6e-54 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02648 K09874 - qsa:O6P43_009088 362.459