Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02641 ATGTCTTCAGAAGAAGCAAATTCATCTGAAGTTTCTTCCCTTTCCCCAACTGTACAAGAATTAGATGAAAATTTGGGTCAAAGGCTGTCAAGGCTTGTCTCTAGGATTATTCGAAATTCGTCTGACTCTCACCATCCACCACAAGATTCAGATCGCCATGGTCGGATCCGGGTCATCATGTTCAATTCTTCTACTGGTAACATGATTGTGATCGAGGGTCCAAGCGATCTTGACTCCATATTCCAAGAGCTAACAGGGAAGTCTGGGGTGTCACCGGCCACCAAGGATTCTATTGAGTCCTTGCCCAGAGTGGTGGTGACTGAAGAAGACATACTCTGTTCAATTTGCTTGGAGGACTACGAAATCGGTGATGAAGCTCGTGAGATGCCATGCAAGCACAGATTCCATTCTCCTTGTGTAGAGAAGTGGTTGAAGATTCATGGGACGTGTCCGCTTTGCCGGTTCTCGATGCCCATGGAAGAAGTGGAGAACAAAACTAGCAGAACCACCGAGGAAGACGGGGACGAAGGGTTAGAAATTGATGAAATTGCTGAAGGGACTATACCTGTAAGTGTATGGGTTCGAACCCATAGAGATAACTCAATGGGTTTGGACAGGGAGTTGGCTCCTAACTCTGGAGATACGAATTCGGATTCACAACATGAGAATTCTGGTCCTGGAGCTCATGAGGATTCATCAATGATACAAGACATGGAATTACAATATGAGAATTCTGGTCCTGGAGCTCGTGAGGATTCATCAATGATACAAGACATGGAATTCTGA 786 0.4529 MSSEEANSSEVSSLSPTVQELDENLGQRLSRLVSRIIRNSSDSHHPPQDSDRHGRIRVIMFNSSTGNMIVIEGPSDLDSIFQELTGKSGVSPATKDSIESLPRVVVTEEDILCSICLEDYEIGDEAREMPCKHRFHSPCVEKWLKIHGTCPLCRFSMPMEEVENKTSRTTEEDGDEGLEIDEIAEGTIPVSVWVRTHRDNSMGLDRELAPNSGDTNSDSQHENSGPGAHEDSSMIQDMELQYENSGPGAREDSSMIQDMEF 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02641 261 SMART ring_2 113 153 IPR001841 -
Bach8g02641 261 MobiDBLite consensus disorder prediction 1 20 - -
Bach8g02641 261 CDD RING-H2_PA-TM-RING 113 154 - -
Bach8g02641 261 Pfam Ring finger domain 113 154 IPR001841 -
Bach8g02641 261 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 38 158 - -
Bach8g02641 261 MobiDBLite consensus disorder prediction 210 230 - -
Bach8g02641 261 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 160 IPR013083 -
Bach8g02641 261 SUPERFAMILY RING/U-box 106 159 - -
Bach8g02641 261 MobiDBLite consensus disorder prediction 203 261 - -
Bach8g02641 261 ProSiteProfiles Zinc finger RING-type profile. 113 154 IPR001841 -
Bach8g02641 261 FunFam E3 ubiquitin-protein ligase RNF181 81 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02641 Bach-Chr8 32869236 32870021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02641 55 223 C3H Transcription Factor Family AT1G26800 34.503 7.40e-29 107