Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02635 ATGGCTCTTCTTAGCTTTCTCCTTCTGGGTTTTCTCTCCACGGCCTTATATGCAAATGGCTTTGGCCATGGTGTTTGGACCAAAGCTCATGCCATTTTCTATGGGGGTAGTGAAGCTTCTGGCACAATGGGTGGGGCTTGTGGTTATGGAAACCTCTACAGTCAAGTTTATGGGACAAACACAGCAGCACTTAGCACTGCACTGTTCAGCAATGGCTTGAGCTGTGGTGCATGTTATGAAATTACGTGTGTGAATGACCCACATTGGTGCCTCCCTGGATCCATTGTAGTAACTGCCACTAATTTCTGTCCCTCAGGTGGTTGGTGTGACCCTCCCAAACACCATTTTGATCTCTCTCATCCTATTTTCCAGCACATTGCCAAATATAAAGCTGGGATTGTTCCTGTAATTTATAGAAGGAGAAGGGGTGGAATCAGGTTCACCATAAATGGCCATTCCTACTTCAATCTAGTGCTAGTAACAAATGTTGGAGGTGCTGGCAATGTGCATTCTGTGGCCATTAAAGGTTCAAGGACTAGATGGCAAGCCATGTCAAGGAATTGGGGCCAAAACTGGCAGAGCAACTCCTACCTCAATGGACAGACCCTTTCCTTTTTGGTGACAACCAGCGACCGCCGCAGCATCGTTTCGTACAATGTTGCCCCAGCAAGCTGGTCTTTTGGACAGACTTATACTGGAAGACAATTTCGTTACTAA 717 0.4644 MALLSFLLLGFLSTALYANGFGHGVWTKAHAIFYGGSEASGTMGGACGYGNLYSQVYGTNTAALSTALFSNGLSCGACYEITCVNDPHWCLPGSIVVTATNFCPSGGWCDPPKHHFDLSHPIFQHIAKYKAGIVPVIYRRRRGGIRFTINGHSYFNLVLVTNVGGAGNVHSVAIKGSRTRWQAMSRNWGQNWQSNSYLNGQTLSFLVTTSDRRSIVSYNVAPASWSFGQTYTGRQFRY 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02635 238 Gene3D - 144 236 IPR036749 -
Bach8g02635 238 SUPERFAMILY Barwin-like endoglucanases 25 162 IPR036908 -
Bach8g02635 238 Gene3D - 13 141 IPR036908 -
Bach8g02635 238 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 44 140 IPR007112 -
Bach8g02635 238 PANTHER EXPANSIN-A15 21 236 IPR002963 GO:0009664
Bach8g02635 238 CDD DPBB_EXPA_N 26 136 - -
Bach8g02635 238 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 154 233 IPR007117 -
Bach8g02635 238 FunFam Expansin 144 236 - -
Bach8g02635 238 Pfam Expansin C-terminal domain 145 222 IPR007117 -
Bach8g02635 238 SUPERFAMILY PHL pollen allergen 141 233 IPR036749 -
Bach8g02635 238 PRINTS Expansin signature 56 70 IPR002963 GO:0009664
Bach8g02635 238 PRINTS Expansin signature 155 176 IPR002963 GO:0009664
Bach8g02635 238 PRINTS Expansin signature 219 235 IPR002963 GO:0009664
Bach8g02635 238 PRINTS Expansin signature 95 105 IPR002963 GO:0009664
Bach8g02635 238 PRINTS Expansin signature 143 155 IPR002963 GO:0009664
Bach8g02635 238 PRINTS Expansin signature 83 94 IPR002963 GO:0009664
Bach8g02635 238 PRINTS Expansin signature 190 211 IPR002963 GO:0009664
Bach8g02635 238 SMART dpbb_1 61 138 IPR007112 -
Bach8g02635 238 Pfam Lytic transglycolase 61 138 IPR009009 -
Bach8g02635 238 PRINTS Expansin/Lol pI family signature 219 233 IPR007118 GO:0005576
Bach8g02635 238 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Bach8g02635 238 PRINTS Expansin/Lol pI family signature 43 61 IPR007118 GO:0005576
Bach8g02635 238 PRINTS Expansin/Lol pI family signature 131 147 IPR007118 GO:0005576
Bach8g02635 238 PRINTS Expansin/Lol pI family signature 25 40 IPR007118 GO:0005576
Bach8g02635 238 PRINTS Expansin/Lol pI family signature 181 195 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02635 Bach-Chr8 32739915 32741546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02635 1 237 Expansin Gene Family AT2G03090 73.092 1.10e-130 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02635 K20628 - qsa:O6P43_004469 418.698