Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02624 ATGGCAAGGAAGAGAAAGGGTGCTGAAGCAGTGGAAGAAGAAAGAAAGCCAGGTGAAGGGACCATGGCATGGGATGAGATGATGAAAGAAGCAGCAGCAGCAATGGGAGGGAGAAGAGCCAGAAAGCGCTTTGTTGGTGTGAGACAAAGGCCATCGGGGAGATGGGTGGCTGAGATAAAGGACACAATCCAGAAGATAAGAGTCTGGTTAGGCACTTTTGATACAGCTGAAGAAGCAGCAAGAGCTTATGATGAGGCTGCTTGCTTGCTTCGCGGAGCCAACACAAGGACAAACTTCTGGCCTTGTTCTCAGCCATCATCAACCCCAGCACTTCCCTCAAAGATCACCAATCTCCTCCTTCAAAGGCTCAAAGCAAGGAACAGCAACTCTAATTCCTCCAGTGCTCTTCCCATCAACCACCAGCAGCAAAAGCAGCAAGAAGATGGAGATGCATATGCATATGGGCAAGTGTCAACTGATTTCTCAGTTGATCAGTTCACTGATTTTCTCAATGATCCTGAAGATTACAGCACAAGCAACCATGACTTTATCAGCAATTGTGCACAGATTGATTACATAACAAGCAGTTTTGAATCTTGCTTAACTGAAAAGGATGACTGCAGGGAAATGGGTTTGGAATATAATTGCAGTAATTTGACAGAAACATCAAGTCCTGCCTGCAATTCAGGAGGGGAAAGATCAGAAGAGGACAGTGAAGAAGAAGGGACTGATCTGGGTTTTCTGGATTTTCAGTTTCTGGACAATGTTGCTCCATCATCTTACTATTCTCCATTTGAGATAGCAGATGAGATTGAGGAACATGTGGAGCCAGAGAACTATGTTGATGAGCCTTCAATGCTCAGAGCTGCAATGAAGAGGATGAAATATGAGAGGAAATTCTCAGCTTCCCTCTATGCCTTCAATGGGATAACTGAATGCTTAAAGTTGAAACTGGGATCTGGAAAATCAAGTGGAAGAGCAATTGCTGATCAGCTAACTAACCTCAAAATGGCATGTAACAAGAACAAAACTGAGGAGAATAAGGAAGAGAAAGAAGAAGAGAGCCCAGAAACACCACCTCACATGGACTTGGACTCATCATCATCATCATCATCCAGTGTTGATGGAGAAATGTTACTTTGGAATTCACTGGATCTTCCTCCTATCTGCTTTGTTAACTAA 1182 0.4382 MARKRKGAEAVEEERKPGEGTMAWDEMMKEAAAAMGGRRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANTRTNFWPCSQPSSTPALPSKITNLLLQRLKARNSNSNSSSALPINHQQQKQQEDGDAYAYGQVSTDFSVDQFTDFLNDPEDYSTSNHDFISNCAQIDYITSSFESCLTEKDDCREMGLEYNCSNLTETSSPACNSGGERSEEDSEEEGTDLGFLDFQFLDNVAPSSYYSPFEIADEIEEHVEPENYVDEPSMLRAAMKRMKYERKFSASLYAFNGITECLKLKLGSGKSSGRAIADQLTNLKMACNKNKTEENKEEKEEESPETPPHMDLDSSSSSSSSVDGEMLLWNSLDLPPICFVN 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02624 393 Coils Coil 334 354 - -
Bach8g02624 393 MobiDBLite consensus disorder prediction 1 20 - -
Bach8g02624 393 ProSiteProfiles AP2/ERF domain profile. 43 100 IPR001471 GO:0003700|GO:0006355
Bach8g02624 393 MobiDBLite consensus disorder prediction 222 241 - -
Bach8g02624 393 MobiDBLite consensus disorder prediction 342 360 - -
Bach8g02624 393 Gene3D AP2/ERF domain 42 100 IPR036955 GO:0003700|GO:0006355
Bach8g02624 393 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 24 301 - -
Bach8g02624 393 MobiDBLite consensus disorder prediction 342 374 - -
Bach8g02624 393 FunFam ethylene-responsive transcription factor RAP2-11 42 101 - -
Bach8g02624 393 SUPERFAMILY DNA-binding domain 43 100 IPR016177 GO:0003677
Bach8g02624 393 SMART rav1_2 43 106 IPR001471 GO:0003700|GO:0006355
Bach8g02624 393 Pfam AP2 domain 43 92 IPR001471 GO:0003700|GO:0006355
Bach8g02624 393 MobiDBLite consensus disorder prediction 128 149 - -
Bach8g02624 393 PRINTS Ethylene responsive element binding protein signature 44 55 IPR001471 GO:0003700|GO:0006355
Bach8g02624 393 PRINTS Ethylene responsive element binding protein signature 66 82 IPR001471 GO:0003700|GO:0006355
Bach8g02624 393 CDD AP2 42 99 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02624 Bach-Chr8 32629292 32630473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02624 41 119 AP2-EREBP Transcription Factor Family AT5G19790 72.152 1.57e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach8g02624 AP2 7.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02624 K09286 - gmx:100786711 463.766