Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02623 ATGAAAAAGTATAAATATCATTTAGCATACAAGGGTTTTCCATCGTCTCAGCAGAAGGGCAAAACAGTTCCCCTTGCCGGAGCCAAGGCAACCACCACAGCCGCTGCCGATGCTTCGCGCCAGCTTTCACAGAAGGAGGCTGACATCCAGATGATGTTGGCCGCCGAGGTCCACCTCCGTACGAAAAATTGTGACTTTCAGATGGAGTGTTATGTCTTCAAGCGCCGCAACGATGGTATTTACATAATTAACCTTGTAAAACATGGGAGAAGCTTCAGCTTGCTGCCAGGGTTATTGTTGCCATTGAAAACCCCCCAGGATATTATTGTTCAGTTAGCCTGGCCTTATGGTCAGAGAGCTGTTCTCAAGTTTGCCCAGTACACCGGTGCCCATGCAATTGCCGGAAGGCATACTCCTGGTACATTCACCAATCAGCTCCAGACATCATATAATGAGCCTCGCCTTCTCATTCTGACTGATCCAAGAACAGACCACCAGCCCATTAAAGAATCTGCTCTTGGAAATATACCAACTATCGCCTTCTGTGACACTGATTCTCCAATGCGTTATGTTGATATTGGCATTCCTGCTAATAATAAGGGGAAGCATAGCATCGGTTGTCTGTTTTGGCTATTAGCCAGGATGGTACTGCAGATGAGGGGTACCATTCGTCCAGAGCTTAAGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAAGAGGAAGTTCCCCCTGCACAAGATTATGCCATTGCGGACTAGTGCCAGTGTTATTGCTGCTGATGGTCAGTGGCCTGCTGCAATTGATCATTCTTGGACTGATTCAGTTCCACAACCAATTCCTGTTGTTCCCAGTGTCGGCTGGACTACAGAAGCTGTTGCAGGAGATTGGGGTGAAGCTGCCGTTCCACCTCCTCAAATTCCTCCTCCAGGAATTGAAAATGTTCCTGCTACTGGCTGGGATTAA 981 0.474 MKKYKYHLAYKGFPSSQQKGKTVPLAGAKATTTAAADASRQLSQKEADIQMMLAAEVHLRTKNCDFQMECYVFKRRNDGIYIINLVKHGRSFSLLPGLLLPLKTPQDIIVQLAWPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSYNEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPELKWIYSSIENLKRPSNKRKRKFPLHKIMPLRTSASVIAADGQWPAAIDHSWTDSVPQPIPVVPSVGWTTEAVAGDWGEAAVPPPQIPPPGIENVPATGWD 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02623 326 NCBIfam 30S ribosomal protein S2 44 232 IPR005707 GO:0003735|GO:0006412|GO:0015935
Bach8g02623 326 FunFam 40S ribosomal protein SA 48 247 - -
Bach8g02623 326 CDD RPS2 52 218 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach8g02623 326 ProSitePatterns Ribosomal protein S2 signature 2. 153 177 IPR018130 GO:0003735|GO:0005840|GO:0006412
Bach8g02623 326 Gene3D - 48 247 - -
Bach8g02623 326 SUPERFAMILY Ribosomal protein S2 44 229 IPR023591 -
Bach8g02623 326 PANTHER 40S RIBOSOMAL PROTEIN SA 38 312 IPR005707 GO:0003735|GO:0006412|GO:0015935
Bach8g02623 326 Hamap 40S ribosomal protein SA [rps-0]. 36 305 IPR027498 GO:0003735|GO:0006412|GO:0015935
Bach8g02623 326 MobiDBLite consensus disorder prediction 306 326 - -
Bach8g02623 326 Pfam Ribosomal protein S2 149 216 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach8g02623 326 PRINTS Ribosomal protein S2 signature 49 67 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach8g02623 326 PRINTS Ribosomal protein S2 signature 191 205 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach8g02623 326 PRINTS Ribosomal protein S2 signature 153 170 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach8g02623 326 PRINTS Ribosomal protein S2 signature 79 88 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach8g02623 326 PRINTS Ribosomal protein S2 signature 170 181 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach8g02623 326 PRINTS Ribosomal protein S2 signature 128 145 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02623 Bach-Chr8 32620316 32622299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02623 36 308 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 61.957 1.24e-117 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02623 K02998 - gmx:100805318 403.29