Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02601 TCGGAGGCATAGGCATTTCCAGTTCGATGGCTCTGTGGAGAGCTCGCGCAGCTTCGTCAACATTGTTCAATATCACCAAGCTCAACATCCTTAAGCCCTCCTCCATCTTCAGCAACAACACCGCCAATGCTTGCCGCAAGTTTTCATCCGATGTTGCAAACACAACTGGTGATCCACGAGAGAGTATTGTGAACCAAATGATGTATCTTGACATAAACTCTCGAATTGGGAGTAGCATGCCACTTTCTTCAATGCGAATTGGAACAATAATTCACAACATTGAGTTGAAGCCGGGGCAAGGTGGCAAGCTGGTCCGAGCAGCTGGAACAAGTGCAAAGATCTTGAAAGATCCCAAAGCAACATATTGTTTAGTTCAACTCCCTTCAGGTGTTAAAAAGATGATTGATTCTCGTTGCAGGGCCACAGTGGGCACAGTATCTAATCCAAAGCATAAAGATAAGAAGCTTAGGAAGGCTGGGCAAAGCAGATGGCTTGGTCGAAGACCCACAGTTCGAGGAGTGGTCATGAATCCTGTAGATCATCCTCATGGTGGAGGAGAAGGTAAGAGCAAGAGCAGTGGTAAATATGGGAGAGTATCCGTTTCTCCTTGGGGTAAGCCAACAAAGGGTGGGTACAAAACTGGACCTCTGAAGCGGAGAAAGTAG 665 0.4677 MALWRARAASSTLFNITKLNILKPSSIFSNNTANACRKFSSDVANTTGDPRESIVNQMMYLDINSRIGSSMPLSSMRIGTIIHNIELKPGQGGKLVRAAGTSAKILKDPKATYCLVQLPSGVKKMIDSRCRATVGTVSNPKHKDKKLRKAGQSRWLGRRPTVRGVVMNPVDHPHGGGEGKSKSSGKYGRVSVSPWGKPTKGGYKTGPLKRRK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02601 212 Pfam Ribosomal Proteins L2, C-terminal domain 67 196 IPR022669 GO:0003735|GO:0005840|GO:0006412
Bach8g02601 212 FunFam 50S ribosomal protein L2 138 212 - -
Bach8g02601 212 PANTHER RIBOSOMAL PROTEIN L2 43 210 IPR002171 GO:0003735|GO:0005840|GO:0006412
Bach8g02601 212 ProSitePatterns Ribosomal protein L2 signature. 160 171 IPR022671 GO:0003735|GO:0005840|GO:0006412
Bach8g02601 212 Gene3D - 56 137 IPR014722 -
Bach8g02601 212 Gene3D Ribosomal protein L2, domain 3 138 212 IPR014726 -
Bach8g02601 212 FunFam 60S ribosomal protein L2, mitochondrial 61 137 - -
Bach8g02601 212 SMART Ribosomal_L2_C_2 65 198 IPR022669 GO:0003735|GO:0005840|GO:0006412
Bach8g02601 212 MobiDBLite consensus disorder prediction 136 212 - -
Bach8g02601 212 SUPERFAMILY Translation proteins SH3-like domain 67 202 IPR008991 -
Bach8g02601 212 NCBIfam 50S ribosomal protein L2 63 208 IPR005880 GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02601 Bach-Chr8 32425355 32426819 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02601 57 177 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 41.860 3.58e-23 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02601 - - qsa:O6P43_031498 295.819