Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02596 GCCATGGCAACAGCGAGGACAGTTAAAGATGTTTCTCCTCACGAGTTTGTGAAGGCTTACTCGTCACATCTCAAGCGCTCTGGCAAGATGGAGCTTCCTGAGTGGACGGATCTGGTAAAAACTGCAACATTTAAGGAGCTGGCTCCTTATGATCCTGACTGGTATTATGTCAGGGCTGCTTCCATGGCAAGAAAGATCTACTTGAGAGGTGGTCTTGGTGTTGGTGCCTTCCGGAGGATCTATGGTGGAAGCAAAAGAAATGGAAGCCGTCCCCCACACTTCTGCAAGAGCAGTGGTGCCATCGCCCGGAACATCCTGCAACAATTGCAAGGAATGAACATTATTGAGGTTGATCCCAAAGGAGGGAGGAGAATTTCTTCCAGTGGTCAAAGGGATCTTGATCAAGTTGCTGGTCGAATTTGCCCATCCATTGAAGTGGCTGTTGTTGATATCTCAGTATCACGCATTGCAGCCTGGAATAGTGATCAGCTTCCTATCTATGAGCCAGGCCTTGATGGGGTGGTGAAGCAATGCCAAGGCAAGAACCTATTCTTCAGCACTGATGTGGAAAAGCATGTCTGTGAGGCTGACATAGTTTTTGTTTCTCTCAATACCCCAACTAAGACTCGTGGTCTTGGAGCCAGCAAGGCTGCAGATCTGACGTACTGGGAGAGTGCAGCTCGCATGATTGCTGATGTCTCAAAATCTGACAAAATTGTGGTTGAGAAATCTACTGTCCCTGTCAAAACCGCTGAGGCCATAGAGAAAATTCTGACCCACAATGGCAAGGGGATTAAATTCACGATTCTTTCAAACCCAGAATTCCTTGCTGAGGGAACTGCTATCCAAGATCTTTTTGAGCCAGACAGGGTTCTCATTGGAGGCAGGGATACCCAGAAGGTCAAAAGGCCATTAAAGCATTGA 924 0.4751 MATARTVKDVSPHEFVKAYSSHLKRSGKMELPEWTDLVKTATFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGAIARNILQQLQGMNIIEVDPKGGRRISSSGQRDLDQVAGRICPSIEVAVVDISVSRIAAWNSDQLPIYEPGLDGVVKQCQGKNLFFSTDVEKHVCEADIVFVSLNTPTKTRGLGASKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNGKGIKFTILSNPEFLAEGTAIQDLFEPDRVLIGGRDTQKVKRPLKH 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02596 306 ProSitePatterns Ribosomal protein S19e signature. 90 109 IPR018277 GO:0003735|GO:0005840|GO:0006412
Bach8g02596 306 Gene3D - 140 306 - -
Bach8g02596 306 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 143 301 IPR036291 -
Bach8g02596 306 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 139 302 IPR028356 GO:0003979
Bach8g02596 306 SMART Ribosomal_S19e_2 6 142 IPR001266 GO:0003735|GO:0005840|GO:0006412
Bach8g02596 306 Gene3D - 1 139 IPR036388 -
Bach8g02596 306 Pfam Ribosomal protein S19e 6 139 IPR001266 GO:0003735|GO:0005840|GO:0006412
Bach8g02596 306 FunFam UDP-glucose 6-dehydrogenase 132 306 - -
Bach8g02596 306 SUPERFAMILY "Winged helix" DNA-binding domain 6 141 IPR036390 -
Bach8g02596 306 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 143 300 IPR001732 GO:0016616|GO:0051287
Bach8g02596 306 FunFam 40S ribosomal protein S19 2 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02596 Bach-Chr8 32400904 32404590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02596 1 140 Cytoplasmic Ribosomal Protein Gene Family AT3G02080 85.000 6.11e-89 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02596 K00012 - gmx:100802280 298.516