Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02567 ATGAATGTTGGATATTTCAAAGTGCTTTCACTGGCAAAGCCTGAAGCTGGGAAATTAACAGTTGGCACAATTTGTCTACTGCTAGCATCCATATCAAATATACTATCAGATATAGCCTTCTTTGATATTACTCGAACAGGAGAACTGCAAAGCAGACTATCTGAAGACACACAAATCATTAAAAATGCTGCAACCACCAATCTCTGTGACATTCTTGGAAACCTAAGCACTGCTTCTATTGGTGTTGGTTTTATGTTTTCATCATCATCGAAACTAACATTGTTGGCTCTAGCTATAGTGCCAATTGTTTCAATTGCTGTAAAAAGAGTTGGACACTATCTAGGTGACCTCTCACGCAGAACTCAAGCAGCAGCCGCTTTAGCTGCTTCAGTTGCTGAGGAATCATTTGGGGCAATTCGAACAGTGAGGTCTTTTGCTCAAGAAAGTAAAGAAGTTGCTGGTATATTTTCAGGAGCAATAAATGCAGCAATTGTATTAACTATTGTTCTTGTTATCACATATGGAGCATCCCTGGTAATCACAGGTTCTATGACTGCTGGCTCTCTAACTTCATTCATCCTCTATAGCGTTACAGTTGGGATATCAGTAGGATCTTTATCAGGGTTATATACAGCAGCAATGAAGGCTGCAGGGGCAAGTCAAAGAGTTTTCTGGCTACTAGAATGTGGCTCTACTATGCCAAGATCAGGAGAAAAGTATCCTATGGATGGAGAAGTGGAGCTAGAAGATGTTTGGTTTGCTTATCCTTCTCGTCCTAATCATATGATACTGAAGGGAATAACGTTACATTTAAGGCCTGGTTCAAAAGTTGCCCTTGTTGGTCCAAGTGGTGGTGGAAAGACCACAATAGCAGACTTGATTCAAAGGTTCTATGACCCTCTTAAGGGACAAATCTTTCTAAATGGGGTTCCCCTCATGGAAATATCTAATGAATATCTTCATAGAAAGGTCAGTATAGTGAGTCAGGAGCCATTTCTTTTCAACTGTTCTCTGGAAGAGAACATTGCATATGGACTCAGTGGAAGAACATGCTACGATGATATAGAAACTATGGCGAAAATGGCAAATGCTCATGAGTTCATAGAAAAATTTCCAGAAAAATACCAAACTGTTGTTGGAGAGCGTGGGTTGAGGCTATCAGTTGGACAGAAACAACGAATAGCAATTGCAAGAGCACTGCTCATGAACCCTAGTCTATTGCTATTGTATGAAGCCACAAGTGCACTTGATGCTGAGAGTGAACATCTTGTTCAGGGTGCCATGGATTCTCTAATGGTTGGTAGGACTGTTCTTGTGATAGCACATAGGCTTTCAACCGTCATAAATGCAGACACTATTGCTATTATATCAGATGGTCCAATAACAGAAAGAGGTACTCATGAAGAGCTGCTCATGAAGGATGGTATTTACTCTCAACTAGTAAGAAGACAACTACAGGCCCCTCCAACTGACTCTCTGCTGTAA 1485 0.4067 MNVGYFKVLSLAKPEAGKLTVGTICLLLASISNILSDIAFFDITRTGELQSRLSEDTQIIKNAATTNLCDILGNLSTASIGVGFMFSSSSKLTLLALAIVPIVSIAVKRVGHYLGDLSRRTQAAAALAASVAEESFGAIRTVRSFAQESKEVAGIFSGAINAAIVLTIVLVITYGASLVITGSMTAGSLTSFILYSVTVGISVGSLSGLYTAAMKAAGASQRVFWLLECGSTMPRSGEKYPMDGEVELEDVWFAYPSRPNHMILKGITLHLRPGSKVALVGPSGGGKTTIADLIQRFYDPLKGQIFLNGVPLMEISNEYLHRKVSIVSQEPFLFNCSLEENIAYGLSGRTCYDDIETMAKMANAHEFIEKFPEKYQTVVGERGLRLSVGQKQRIAIARALLMNPSLLLLYEATSALDAESEHLVQGAMDSLMVGRTVLVIAHRLSTVINADTIAIISDGPITERGTHEELLMKDGIYSQLVRRQLQAPPTDSLL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02567 494 SMART AAA_5 273 466 IPR003593 GO:0016887
Bach8g02567 494 Pfam ABC transporter transmembrane region 37 152 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bach8g02567 494 Pfam ABC transporter 264 414 IPR003439 GO:0005524
Bach8g02567 494 Gene3D ABC transporter type 1, transmembrane domain 36 243 IPR036640 GO:0005524|GO:0016020
Bach8g02567 494 SUPERFAMILY ABC transporter transmembrane region 12 228 IPR036640 GO:0005524|GO:0016020
Bach8g02567 494 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 37 215 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bach8g02567 494 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 36 152 IPR039421 -
Bach8g02567 494 ProSitePatterns ABC transporters family signature. 386 400 IPR017871 GO:0005524|GO:0016887
Bach8g02567 494 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 246 483 IPR003439 GO:0005524
Bach8g02567 494 FunFam ABC transporter B family member 25 244 486 - -
Bach8g02567 494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 240 484 IPR027417 -
Bach8g02567 494 Gene3D - 244 486 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02567 Bach-Chr8 31922827 31927949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02567 37 490 Calmodulin-binding Proteins AT2G36910 38.636 2.63e-89 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02567 - - cave:132180934 661.759