LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach8g02562	ATGGTGAAGACTTCAAATGCTCGATTCTCTTGCATCCTACTCTTAGTTCTTCAACACCTCTTCAGTATCGGCGCCGACAACTCTAACGTATACCATGCAGTCGAAGATTTGGCAATTAACTGCGGCGCCTCCGAAAATTCAACAAGCGATTTAGATCAAACTCGGATCTGGATTGGAGACAACGGTTCAAATTATCAATTTTCCCTGATAGAACATGAGAAATACTCAGTTCAGGCAAGGGCTACTCAGGGCAATCCTTCAGTTCAACAAGTCCCCTACTACACTGCACGTCTATCTCTCTCTGAGTTCACCTACTCGGTTAGGGTCACAGAGGGCCAAAAGTTCATTCGCCTTCACTTTTTCCCAGCTTCATACGCCAACTTCGATCGCTCCAACTCCCTATTCTCTGTCAAAGCTGGCCCTTATACCCTTCTTAAGGACTTCAATGCTTCAGCCATCAAAGAGGAAAGTTTCTTCAGAGAATATTGCATCAACGTTGATCAAGGTCAGAGGCTAAACATAACCTTCATACCGAACCTCACCCTTCCAGATTGCTACGCCTTTATCAACGGGATTGAGGTTGTTTCTATGCCTGCAAATCTTTATTACACGAAACCTGGTGGCGAAGGGTTAAAGCTGGTTGATCATGATGGGATTTCCTTCATGATCGAGAACAACATGGCCCTGGAGACAGTATACAGGATCAACGTTGGTGGGTCTCAAATCACATCAGAGAAAGACACTGGTATGTACAGGTCTTGGTACGATGATAATTCTTACTTGGAGAAGGTGTATGCACATAGTCTACCAGTTGCGTATGGCAGTCATTGGAGACCGAAGTATGCAATAATTCCCAACTACACTGCACCTGATGATGTATATCTCACTGCTCGCAGTTACGGGAAGGATGCTACTTCAAAGTATAATGTAACTTGGAACTTTAAAGTGGATCCACAGTTTACTTACATGGTTAGGCTACATTTCTGTGAGATTGAGTTGACACTTACAGAAGCAGACCAAAGAGTTTTTCAGATCTTTATAGCTGACATGCTGGCAGAGAAACGTGCTGACGTGATTTTGTGGACACGCCAAAATCTTGTTCCCTATTATAAGGACTACGTCCTTTTGTTCAATGAACTTGGAGGGTTGAAGCAACTGGTCAACCTTTCAATTAAGTTGCAGCCAGTGCTAACACAGTTCGCTGACGATGTCATATTGAACGGGGTTGAAATTTTCAAAGTAAGCGACATTGCTACCGGAAATCTTGGTGGTGTCGACCTCGAACCACGTTTATCATCCTCTCAGTCATTAGTGCCATCCACCAAACCACCTAAAAGCTCAAGAACAACGACCATAGTTGCCGCTGTCGTTGGTGCAGGATCAGGTATCCTTGTTATATCTTTTATATGTTTCCTAATTTTTCGGCGAACAACCCAAGCTTCTGCCAACAATGGAAATTCAAAGAGCAGACACATTCCTCTCGTCCCATATAAATCAAGCAAGTCCCTTGGTTCATTATTGCCGTCTGATCTATGTCGTTACTTTTCATTGGCTGAGATTACAGCTGCCACAAATGACTTTGATGAAATTTTGGTCATTGGGGTTGGAGGGTTTGGTAAAGTGTACAAAGGGTACATAGATGAGGGTACGCCCGTTGCAATCAAACGGCTCAAATCAGGTTCACAACAAGGTGCCCATGAATTTGAAACCGAGATCGAGATGCTCTCTCAGCTGCGCCACCTCCACTTGGTGTCTCTCATCGGTTACTGCAACGACGGCAAAGAGATGATACTCGTCTACGATTTCATGGCTCGTGGGACGCTTCGTGACCATTTATATGACTCTGATAACCAACCACTTTCCTGGAAGCAAAGACTGGAGATTTGTCTAGGTGCAGCCCGAGGACTACACTATCTTCATACAGGTGCGAAACACAATATCATTCACCGTGATGTAAAAACTACGAACATTCTGTTGGATGAGAATTGGGTGGCAAAGGTTTCGGATTTTGGGTTGTCCAAGGTTGAACCCACGGGGATGTCCAAGTCCCACATTACTACTGTAGTCAAGGGTAGCCTTGGATATTTGGACCCAGAATACTACAAGCGTCAACGGTTGACTCATAAGTCCGACGTGTACTCTTTCGGTGTGGTATTGCTGGAGGTATTGTGTGCGAGGCCACCCTTGCTCCGCTCAGTGGACAAGCATCAGGCAAGCTTAGTGGAATGGGTGCACAAATGCCACAAAAATGGAGAAATTGATCGAACGGTTGATCATTTCTTGAGAGGAACCATAGTACCTCAGTGTTTGAATAAATACGTTGATATGGCATTCAATTGTTTGCTTGAAGATGGAACTCAACGGCTATCAATGAATGATGTGGTGTGGAGCCTCGAGTTTACAATGGAACTCCAGGAGAGCATGGAGGGCACTTTGGTTGATGGAACTGAGGTTGAGAAAGAGGGAGAGAAGAGAGACCTCTTAACAAATTCTGTGAGTGACGATGTAGAGAATGATGTGCTGTTTATGAGTATTGATGAATCATCAACAGGATCTGAGATGAGCAAGATGACCACGAGCAGTAGTGAGGAGAAAGCGTTGTTTCCAAGTTAA	2613	0.4439	MVKTSNARFSCILLLVLQHLFSIGADNSNVYHAVEDLAINCGASENSTSDLDQTRIWIGDNGSNYQFSLIEHEKYSVQARATQGNPSVQQVPYYTARLSLSEFTYSVRVTEGQKFIRLHFFPASYANFDRSNSLFSVKAGPYTLLKDFNASAIKEESFFREYCINVDQGQRLNITFIPNLTLPDCYAFINGIEVVSMPANLYYTKPGGEGLKLVDHDGISFMIENNMALETVYRINVGGSQITSEKDTGMYRSWYDDNSYLEKVYAHSLPVAYGSHWRPKYAIIPNYTAPDDVYLTARSYGKDATSKYNVTWNFKVDPQFTYMVRLHFCEIELTLTEADQRVFQIFIADMLAEKRADVILWTRQNLVPYYKDYVLLFNELGGLKQLVNLSIKLQPVLTQFADDVILNGVEIFKVSDIATGNLGGVDLEPRLSSSQSLVPSTKPPKSSRTTTIVAAVVGAGSGILVISFICFLIFRRTTQASANNGNSKSRHIPLVPYKSSKSLGSLLPSDLCRYFSLAEITAATNDFDEILVIGVGGFGKVYKGYIDEGTPVAIKRLKSGSQQGAHEFETEIEMLSQLRHLHLVSLIGYCNDGKEMILVYDFMARGTLRDHLYDSDNQPLSWKQRLEICLGAARGLHYLHTGAKHNIIHRDVKTTNILLDENWVAKVSDFGLSKVEPTGMSKSHITTVVKGSLGYLDPEYYKRQRLTHKSDVYSFGVVLLEVLCARPPLLRSVDKHQASLVEWVHKCHKNGEIDRTVDHFLRGTIVPQCLNKYVDMAFNCLLEDGTQRLSMNDVVWSLEFTMELQESMEGTLVDGTEVEKEGEKRDLLTNSVSDDVENDVLFMSIDESSTGSEMSKMTTSSSEEKALFPS	870

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach8g02562	870	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	647	659	IPR008271	GO:0004672\|GO:0006468
	Bach8g02562	870	CDD	STKc_IRAK	533	799	-	-
	Bach8g02562	870	FunFam	FERONIA receptor-like kinase	227	415	-	-
	Bach8g02562	870	Pfam	Protein tyrosine and serine/threonine kinase	532	795	IPR001245	GO:0004672\|GO:0006468
	Bach8g02562	870	ProSiteProfiles	Protein kinase domain profile.	527	801	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach8g02562	870	FunFam	FERONIA receptor-like kinase	36	198	-	-
	Bach8g02562	870	SMART	serkin_6	527	801	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach8g02562	870	PANTHER	OS03G0124300 PROTEIN-RELATED	12	480	IPR046957	GO:0004672
	Bach8g02562	870	Pfam	Malectin-like domain	39	414	IPR024788	-
	Bach8g02562	870	ProSitePatterns	Protein kinases ATP-binding region signature.	533	555	IPR017441	GO:0005524
	Bach8g02562	870	FunFam	Receptor-like protein kinase FERONIA	499	602	-	-
	Bach8g02562	870	Gene3D	-	37	198	-	-
	Bach8g02562	870	Gene3D	-	227	415	-	-
	Bach8g02562	870	MobiDBLite	consensus disorder prediction	847	870	-	-
	Bach8g02562	870	SUPERFAMILY	Protein kinase-like (PK-like)	503	802	IPR011009	-
	Bach8g02562	870	FunFam	Receptor-like protein kinase FERONIA	603	820	-	-
	Bach8g02562	870	CDD	TM_EGFR-like	445	476	-	-
	Bach8g02562	870	Gene3D	Transferase(Phosphotransferase) domain 1	603	819	-	-
	Bach8g02562	870	Gene3D	Phosphorylase Kinase; domain 1	497	602	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach8g02562	Bach-Chr8	31869021	31871633	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach8g02562	31	870	Receptor kinase-like Gene Family	AT3G51550	48.509	0.0	738

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Bach8g02562		Malectin_like	9.6e-43	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach8g02562	-		-	pcin:129293555	879.782