Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02530 ATGGGTTTGGGAGCCACACAGAAGGGATTGAGGAAAGGTCCTTGGACTCATGAAGAGGATCATCTGCTTACTGAATATGTCTCCTTGCATGGGGATTGCAGCTGGAGTTCTGTAGCATCGTTTGCAGGCTTAAATAGGAGTGGCAAAAGTTGTAGGTTAAGATGGGTGAACTATCTGAAGCCTGGACTCAAGAAAGGTAGACTAACACCTCAAGAAGAAAGCATCATTTTTGAACTACATGCTGTGCTGGGCAACAAGTGGTCTACCATAGCCAAGTGCTTGCCTGGAAGAACAGACAATGAGATCAAGAACTTCTGGAGAACAAACTTCAAGAACAAAGAAAAACCCTCTTCTAAGAAGTCAGAAAAGCGAAGAGCACAGGGCCTAAAGCAGATCAAACAGGTGCAACAAGAGGAGAAGCAACTTCAGGAATGTGATAGGAAACCTAAATTTGAGACAGAACAAACTGAAGCACAAGAAAATAAGCAAGAGATGGCTTTCATGAGCCCATCAATAGAGGACCAAGAAATTTATTCTTCCTGGTCTGACATGATGGGATGTGAAGGCATTTTGGTTAACCTTTGGAACCTTGATGAACAACCACAGGGTCATCATGCAGATAATTTAAACCAGTTCAGCAATAATGTCATGCTAAACCAAGCTACGTTTGGAGGTGATCCCAGTAAGCTGGTGGCACAGGATCAAGATAGAACATTTTGTCTTGATGAAGTTTTCGATAATCTTTGCTTTGAAAAGTATATGTTTGGCTAA 771 0.4202 MGLGATQKGLRKGPWTHEEDHLLTEYVSLHGDCSWSSVASFAGLNRSGKSCRLRWVNYLKPGLKKGRLTPQEESIIFELHAVLGNKWSTIAKCLPGRTDNEIKNFWRTNFKNKEKPSSKKSEKRRAQGLKQIKQVQQEEKQLQECDRKPKFETEQTEAQENKQEMAFMSPSIEDQEIYSSWSDMMGCEGILVNLWNLDEQPQGHHADNLNQFSNNVMLNQATFGGDPSKLVAQDQDRTFCLDEVFDNLCFEKYMFG 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02530 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 114 IPR017930 -
Bach8g02530 256 ProSiteProfiles Myb-like domain profile. 60 110 IPR001005 -
Bach8g02530 256 Pfam Myb-like DNA-binding domain 12 59 IPR001005 -
Bach8g02530 256 Pfam Myb-like DNA-binding domain 65 108 IPR001005 -
Bach8g02530 256 CDD SANT 69 110 IPR001005 -
Bach8g02530 256 ProSiteProfiles Myb-like domain profile. 7 59 IPR001005 -
Bach8g02530 256 FunFam Myb transcription factor 12 64 - -
Bach8g02530 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 63 IPR017930 -
Bach8g02530 256 Gene3D - 9 65 - -
Bach8g02530 256 MobiDBLite consensus disorder prediction 109 129 - -
Bach8g02530 256 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 8 171 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bach8g02530 256 CDD SANT 14 59 IPR001005 -
Bach8g02530 256 SMART sant 64 112 IPR001005 -
Bach8g02530 256 SMART sant 11 61 IPR001005 -
Bach8g02530 256 SUPERFAMILY Homeodomain-like 9 106 IPR009057 -
Bach8g02530 256 Gene3D - 67 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02530 Bach-Chr8 31399226 31400314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02530 9 239 MYB Transcription Factor Family AT3G30210 43.802 1.12e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach8g02530 Myb_DNA-binding 2.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02530 K09422 - gmx:100785540 233.417