Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02518 ATGGCTGATTTAGTTATCATTAGTGTTACTGTTGGCGTGGCCCTTGGACTATTGATAGCTTGCCTCTTATTCTTTGGCATAAGGTGGTACAAGAATCGTGCTCATCTTAGCCGATGTGCAAATGAGCGTAGTTCAAGTTTAGCAACTCTTCCAATACGCACAAATGGATTAGAAACAAGCACTGACTTTAGCGCCTCTATCACAAATTCTATAACCACTTCAAGGACAGAAAATCAGCAGAAAAAACTCCATTTCTCTTGGTGGAATCATCAAAACAAAGATCGGTTTGCTTCAGCATCAGGAATTCTTAAGTACTCATACAAAGACATTCAAAAGGCTACACAAAATTTCACAACTGTCTTGGGCCAAGGGTCATTTGGTGTGGTTTATAAAGCTACAATCCCAACAGGAGATGTGGTTGCTGTGAAGGTGCTTGCTTCCAATTCCAAACAAGGGGAGAAAGAGTTTCAAACAGAGGTGTTTCTGCTTGGTAGACTGCATCATCGGAATCTTGTAAATTTGGTAGGATATTGTGTAGATAAAGGACAACGCATACTTGTTTATGAGTTCATGAGCAATGGAAGTTTAGAAAAGATTCTGTATGGTGAAGAACCGGATTTGAGTTGGGATGATAGGCTGCAAATTGCTATTGATATTTCACACGGAATTGAGTACCTTCACGAAGGAGCAGTTCCACCAGTCATACATCGTGATCTGAAATCTGGCAATATATTGCTAGATCACACAATGAGAGCTAAGGTTGCTGATTTTGGGCTCTCAAAGGAAGAGGTCTTTGATGGCAGGAACTCTGGCCTTAAAGGTACGTACGGCTACATGGACCCGGCGTACATCTCCTCAAACAAGTTCACAATGAAGAGTGACATTTACAGTTTTGGCATTATCATTTTTGAGCTCATCACTTCTATCCACCCTCATCAAAATCTGATGGAATATATTAACCTTGCTGCAATGGATCATGATGGTGTAGACGAGATTCTTGACAAGCAACTTGTGGGAAAATGCAACCTTGAGGAAGTGAGGCAGCTAGCGAAAGTTGCTCACAAATGTTTGCACAAATCACCCAAAAAACGGCCTACTATAGGTGAGGTTTCCCAGGGTCTATTGAGGATAAAACAAGGGCGCCTCCCCAAAGAAAATACCATGTCATTTGCAGCCAGGAATATCAGTAACTTATCTAGAGCTTTGAGTCGAATAGAGGATCAACAGGTTGAGTTGAGTAGGATAACCAGCATGAACCAGAGAGCAGCTGTGCCTCTATGA 1281 0.4169 MADLVIISVTVGVALGLLIACLLFFGIRWYKNRAHLSRCANERSSSLATLPIRTNGLETSTDFSASITNSITTSRTENQQKKLHFSWWNHQNKDRFASASGILKYSYKDIQKATQNFTTVLGQGSFGVVYKATIPTGDVVAVKVLASNSKQGEKEFQTEVFLLGRLHHRNLVNLVGYCVDKGQRILVYEFMSNGSLEKILYGEEPDLSWDDRLQIAIDISHGIEYLHEGAVPPVIHRDLKSGNILLDHTMRAKVADFGLSKEEVFDGRNSGLKGTYGYMDPAYISSNKFTMKSDIYSFGIIIFELITSIHPHQNLMEYINLAAMDHDGVDEILDKQLVGKCNLEEVRQLAKVAHKCLHKSPKKRPTIGEVSQGLLRIKQGRLPKENTMSFAARNISNLSRALSRIEDQQVELSRITSMNQRAAVPL 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02518 426 Gene3D Transferase(Phosphotransferase) domain 1 191 397 - -
Bach8g02518 426 Pfam Protein tyrosine and serine/threonine kinase 117 372 IPR001245 GO:0004672|GO:0006468
Bach8g02518 426 ProSitePatterns Protein kinases ATP-binding region signature. 121 143 IPR017441 GO:0005524
Bach8g02518 426 ProSiteProfiles Protein kinase domain profile. 115 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g02518 426 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 402 - -
Bach8g02518 426 SUPERFAMILY Protein kinase-like (PK-like) 86 372 IPR011009 -
Bach8g02518 426 Gene3D Phosphorylase Kinase; domain 1 75 190 - -
Bach8g02518 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Bach8g02518 426 CDD STKc_IRAK 121 377 - -
Bach8g02518 426 SMART serkin_6 115 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g02518 426 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 89 190 - -
Bach8g02518 426 Coils Coil 388 408 - -
Bach8g02518 426 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 191 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02518 Bach-Chr8 31274536 31277516 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02518 106 379 Receptor kinase-like Gene Family AT4G02010 41.638 2.04e-70 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Bach8g02518 PK_Tyr_Ser-Thr 9.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02518 - - gmx:100794239 680.633