Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02477 ATGGAAACTGTAGTGGCAACAGTGAGTGGTTACCATGGCACAGAGCGATCCAACCTCATTAAGTTGATAACAAACGCTGGTGGGAATTATGTTGGCAGGATGTCAAAGTCAATCACACACCTTATTTGTTGGAAATTTGAGGGAAAGAAATATGATCTTGCCCATAAATTCAACACAATTATAGTGAACCACCAATGGGTTGAAGACTGCATCAAGCAAGGAAGGCGTGTCCCAGAGGATTCTTACGTCTTGCAAAGTGGACAAGAAGTAGGGCCATTGATGCTGGAAGTTCCACTACTTGTTCAGACAAGTAGCTTGACTAGGAAAAATTTGCTAAGTCACATATCAGATGATCTTGGCTCCCCAAACCAAAATAGTGAGTTTACTTCTGGAGATTCTGGAAATCCTGTTTGGAAAGATTCTTCTATAATGAATAAGCATAAGGAGTTAAGTTCTCATTCTTCTCGAGAAGCAAGGAAAGAAAAAAGAAAGAACTCCGATAGTGATGGAGTTGCTACCTCAGCTGAATGTTCTCGTAGTCGTAGAGGAAGAAGGCTTGTGAAAAATAATATTCATGAAGAAATGTTGGATCCTTTGCTTTCCAATTCAAACCATGAGGACAAGCATGGTAGAAGTAGGCTACATACTGATGCTGCAGCTCCCTCTTGCCTCTCTGTAGGTGTGACTAATGATAATATTCAAGAAAATAGAGAAGGATCGGATGATGGATCAACTAATCAAAGTGGAATGATCAATGTAGCTTCAGATGGAACTGAACAGATCAAAGACTCAAATAATTTATCCATTTCTAGAAATTTATCTGTGGAAGATCTTCCCCCTACTATGGAGCAAACGTCAGCAAATGTACATTCTAATGTTGAAAATGACCAGGTTGCTGGATCAACTACTTCAACAGAGTTGTCATGTGTTATATGTTGGACAGAGTTCAGCTTAACACGGGGTATTTTACGATGCGGACATCGGTTTTGTTATTCATGCATCCAGAATTGGGCTGATCAATTGCATTCAAGGAGAAAACCTTTGACCTGCCCTTTGTGCAAGATGTCTTTTGCGCACATCTTAAAGGTTGAGGATGCAGCCTCTGCTGATCAAAAAGTATACTCCCAAACAATTCCTTGTGGTATTCCAACTTCAGATGTCTTTATCCTTGTGGATCAAGAATCACCCAATTATGGTTCTGAGATAACTGCTTGTGTTGTCTGCCGTGGTCGGGAACCCGAGGATCTCCTTGTTAGTTGTAATGTTTGCCAGATTCGACGAATCCATTCCTATTGCCTGGATCCTCCATTATTTCCATGGGCATGCAGTCACTGCAAGGATCTCCGGATGCTTTACCAGAATCGCTGA 1368 0.4115 METVVATVSGYHGTERSNLIKLITNAGGNYVGRMSKSITHLICWKFEGKKYDLAHKFNTIIVNHQWVEDCIKQGRRVPEDSYVLQSGQEVGPLMLEVPLLVQTSSLTRKNLLSHISDDLGSPNQNSEFTSGDSGNPVWKDSSIMNKHKELSSHSSREARKEKRKNSDSDGVATSAECSRSRRGRRLVKNNIHEEMLDPLLSNSNHEDKHGRSRLHTDAAAPSCLSVGVTNDNIQENREGSDDGSTNQSGMINVASDGTEQIKDSNNLSISRNLSVEDLPPTMEQTSANVHSNVENDQVAGSTTSTELSCVICWTEFSLTRGILRCGHRFCYSCIQNWADQLHSRRKPLTCPLCKMSFAHILKVEDAASADQKVYSQTIPCGIPTSDVFILVDQESPNYGSEITACVVCRGREPEDLLVSCNVCQIRRIHSYCLDPPLFPWACSHCKDLRMLYQNR 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02477 455 MobiDBLite consensus disorder prediction 115 265 - -
Bach8g02477 455 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 391 454 IPR013083 -
Bach8g02477 455 MobiDBLite consensus disorder prediction 178 192 - -
Bach8g02477 455 ProSiteProfiles BRCT domain profile. 1 84 IPR001357 -
Bach8g02477 455 PANTHER F5A8.9 PROTEIN 145 454 - -
Bach8g02477 455 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 286 378 IPR013083 -
Bach8g02477 455 MobiDBLite consensus disorder prediction 142 169 - -
Bach8g02477 455 MobiDBLite consensus disorder prediction 223 265 - -
Bach8g02477 455 MobiDBLite consensus disorder prediction 115 140 - -
Bach8g02477 455 Pfam Zinc finger, C3HC4 type (RING finger) 309 353 IPR018957 GO:0046872
Bach8g02477 455 SMART BRCT_7 1 74 IPR001357 -
Bach8g02477 455 SMART ring_2 309 353 IPR001841 -
Bach8g02477 455 Pfam twin BRCT domain 4 66 IPR001357 -
Bach8g02477 455 SUPERFAMILY BRCT domain 2 85 IPR036420 -
Bach8g02477 455 SUPERFAMILY FYVE/PHD zinc finger 395 447 IPR011011 -
Bach8g02477 455 ProSiteProfiles Zinc finger RING-type profile. 309 354 IPR001841 -
Bach8g02477 455 Gene3D BRCT domain 1 89 IPR036420 -
Bach8g02477 455 SUPERFAMILY RING/U-box 308 361 - -
Bach8g02477 455 MobiDBLite consensus disorder prediction 199 215 - -
Bach8g02477 455 ProSitePatterns Zinc finger RING-type signature. 325 334 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02477 Bach-Chr8 30668791 30673980 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02477 22 90 Core DNA Replication Machinery Family AT4G02110 42.254 1.88e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02477 - - pcin:129291305 507.294