Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02456 ATGGCAAGAATCAACAGAAGGGGTCCCCAGAGGCCAATGGAGTTAATCCCTGATCCAATCAAACGCCGAGCTGTCTTCTCCAAACGTCATTCAGACCTTTACAAGAAGGCCTATGAACTCAGCATCTTATGCGGAATAGACATTGCTCTTGTCATGTTCTCTCCTACGGATAAGGTATACACTTTTGGCTGTCCTAATCTGAATTCCCTCATGGATCGCTACCTCATACAACCTCAAGATCCTATGAATCACCCTCAAAACATAATTGAGGGTCACAACAACCCCAACCTGCTTGTCCTCAACGAAAAGCTCAACCTACTAAAGGAGCAGTTTGATGCTGAAAAGAAACGAGGGAACGAGCTTGATCAAATGGAGAAGGCTAGCGAAGAGCAAAACTGGATGAAAGGTCCTATTGATCAAATGACTGAACCAAAACTCCAGCATTTTCAGAATGCACTGATGGGGTTGAAGAAGAAGGTGCAGGAGGCTGAGAGGCTTAGGGTTCAAAGTTCTAATGCTGAATCATTTGCCAAGGTTTTTTCAGGAAGTTGTTCCTTTCATCCACCTCAGTTTGTTGGAAATGGTAATGGTTCTTTCAGTGTACCTAAGTTATTTCCAGGTGAACATTCCTTTTCTTCCAATGTGGGTCAGGATTTTGCTGGTGGTTCTTACTCAAAACTTGGTCCCCAAGTGCAACACCCCCCGCCACCAATGGTGTTTCTACCGCCAATGTTGCAGAATCCTGTGGCTTATCAAAATCCTCTGCTTCGTAATTTAGCTTTTGATAAGAATGCAATTGTCATGGTGCCAACACCCCGCAGCCATAACAACGTGGGAACTGGAGATGGACGCCGATACTTCTGA 864 0.4479 MARINRRGPQRPMELIPDPIKRRAVFSKRHSDLYKKAYELSILCGIDIALVMFSPTDKVYTFGCPNLNSLMDRYLIQPQDPMNHPQNIIEGHNNPNLLVLNEKLNLLKEQFDAEKKRGNELDQMEKASEEQNWMKGPIDQMTEPKLQHFQNALMGLKKKVQEAERLRVQSSNAESFAKVFSGSCSFHPPQFVGNGNGSFSVPKLFPGEHSFSSNVGQDFAGGSYSKLGPQVQHPPPPMVFLPPMLQNPVAYQNPLLRNLAFDKNAIVMVPTPRSHNNVGTGDGRRYF 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02456 287 Gene3D - 18 96 IPR036879 GO:0003677|GO:0046983
Bach8g02456 287 Coils Coil 97 117 - -
Bach8g02456 287 PANTHER MADS BOX PROTEIN 13 161 - -
Bach8g02456 287 ProSiteProfiles MADS-box domain profile. 12 66 IPR002100 GO:0003677|GO:0046983
Bach8g02456 287 SUPERFAMILY SRF-like 12 77 IPR036879 GO:0003677|GO:0046983
Bach8g02456 287 PRINTS MADS domain signature 8 28 IPR002100 GO:0003677|GO:0046983
Bach8g02456 287 PRINTS MADS domain signature 43 64 IPR002100 GO:0003677|GO:0046983
Bach8g02456 287 PRINTS MADS domain signature 28 43 IPR002100 GO:0003677|GO:0046983
Bach8g02456 287 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 16 62 IPR002100 GO:0003677|GO:0046983
Bach8g02456 287 Coils Coil 146 166 - -
Bach8g02456 287 SMART madsneu2 4 65 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02456 Bach-Chr8 30474967 30475830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02456 23 166 Type I MADS-box Gene Family AT5G60440 38.514 2.09e-23 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Bach8g02456 SRF-TF 1.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02456 - - ghi:107925389 144.436