Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02415 ATGACCAGACAGAAGGTGAAGCTGGCCTTCATAGCCAATGACTCAAAGCGAAAAACAATATTCAGGAAAAGAAAGAAGAACCTGATGAAGAAGGTGGAGGAGCTGAGCATCTTATGTGGGATCGATGCATGTGCCATAATGTTCAGTCCCTATGATTCCCAGCCAGAGGTTTGGCCGTCTCCATCGGGTGTCTACAACGTGCTGGCTAGGTTCATGGGAATGCCTGAACCAGATCAGAGAAAGAAGATGATTACCCAAGAGGGCTTCCTGAAGGAGAGAATCTTCAAGACCCAAGACCAGATCCTGAAGGTGAAAAAGGAGAATCGTAGGAAAGAGATGACCCATGCTATGCATCAATACCTTGGTGGTGAGAAGCATGTGAACCATGTGATGAGCGTGGCTCATCTAAAGGATCTGACTTGGGTTGTTGAGGAAAACCTGAGGGAAATCACTAGGAAGATGGAGGAAATGATGAACAAAAATCAGAGTCAAGCCCAAGTGGCGGCGCTGGCAACGGCAGATAGAGCCAAAGAACTACCGGAACCGAAGCAAAGGTGGAGCCTGAGCAGGGTGAAGGGATGA 582 0.4811 MTRQKVKLAFIANDSKRKTIFRKRKKNLMKKVEELSILCGIDACAIMFSPYDSQPEVWPSPSGVYNVLARFMGMPEPDQRKKMITQEGFLKERIFKTQDQILKVKKENRRKEMTHAMHQYLGGEKHVNHVMSVAHLKDLTWVVEENLREITRKMEEMMNKNQSQAQVAALATADRAKELPEPKQRWSLSRVKG 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02415 193 CDD MADS_SRF_like 2 83 IPR033897 GO:0000981|GO:0000987|GO:0045944
Bach8g02415 193 Coils Coil 147 167 - -
Bach8g02415 193 FunFam agamous-like MADS-box protein AGL80 13 97 - -
Bach8g02415 193 SUPERFAMILY SRF-like 2 95 IPR036879 GO:0003677|GO:0046983
Bach8g02415 193 ProSiteProfiles MADS-box domain profile. 1 49 IPR002100 GO:0003677|GO:0046983
Bach8g02415 193 Gene3D - 13 94 IPR036879 GO:0003677|GO:0046983
Bach8g02415 193 PANTHER MADS BOX PROTEIN 3 158 - -
Bach8g02415 193 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 51 IPR002100 GO:0003677|GO:0046983
Bach8g02415 193 MobiDBLite consensus disorder prediction 176 193 - -
Bach8g02415 193 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach8g02415 193 MobiDBLite consensus disorder prediction 161 193 - -
Bach8g02415 193 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach8g02415 193 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach8g02415 193 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02415 Bach-Chr8 29304038 29304619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02415 1 183 Type I MADS-box Gene Family AT5G48670 48.087 3.98e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Bach8g02415 SRF-TF 5.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02415 - - gmx:100813231 214.542