Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02334 ATGCGAGATCATTTTGTCCTGTTGGCTAGTCGGCTCCTAACTGAATCTACCCTTGAAGCTGCTATTGAGGATGTAAGGAGGATGCAGCAGGCCATTCCTTCATCAACCAATGATGATATGATTCACGTACATAAAATGGATGTAGAAAATAGGTCATCTCCAATTAAGATAGTAGAGTGTCGAATATGCCACGATGAGGATGAAGACTCAAACATGGAGACACCCTGTTCTTGTTGTGGCAGCCTGAAGTATGCACATCGAAGATGTGTTCAAAGATGGTGCAATGAGAAAGGTGATACCATCTGTGAGATTTGTCAACAGCCATTTGAGCCTGGTTATACAGCACCACCTCCTGTATTACACTATGGTGGTAGGCCATTGAATTTCAGAGGGAATTGGGAGATATTCAGAAGGGATCTACATAATCATCAATTCATATCAATGGTTGGAGCTGATAGCGAATTTTTGGACAATGACTTTGAATATTCAGGCCCTTCTATGAGGAGTCTGATATGCTGCCGCATTGTTGCAATTCTTTTCATGATTCTTCTCATTTTACGGCATACCCTTCCAATTATCCTCAGTGGGGCTGGCGAATATTCATTGACACTTTTCACGTTACTGACTTTGAGAACCATTGCAATACTTCTACCTGTATATATGATGATCAAAGCATTTACTGCATTCCAACGACGCCGAAACCAGGTTTAA 711 0.4149 MRDHFVLLASRLLTESTLEAAIEDVRRMQQAIPSSTNDDMIHVHKMDVENRSSPIKIVECRICHDEDEDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICQQPFEPGYTAPPPVLHYGGRPLNFRGNWEIFRRDLHNHQFISMVGADSEFLDNDFEYSGPSMRSLICCRIVAILFMILLILRHTLPIILSGAGEYSLTLFTLLTLRTIAILLPVYMMIKAFTAFQRRRNQV 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02334 236 ProSiteProfiles Zinc finger RING-CH-type profile. 52 112 IPR011016 GO:0008270
Bach8g02334 236 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 44 114 IPR013083 -
Bach8g02334 236 SMART ringv_2 59 106 IPR011016 GO:0008270
Bach8g02334 236 CDD RING_CH-C4HC3_MARCH 60 106 - -
Bach8g02334 236 Pfam Protein of unknown function (DUF3675) 111 225 IPR022143 -
Bach8g02334 236 Pfam RING-variant domain 60 105 IPR011016 GO:0008270
Bach8g02334 236 FunFam Zinc finger family protein 48 115 - -
Bach8g02334 236 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 235 IPR033275 -
Bach8g02334 236 SUPERFAMILY RING/U-box 58 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02334 Bach-Chr8 27812654 27814728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02334 45 106 C3H Transcription Factor Family AT2G37950 41.538 6.14e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02334 - - qsa:O6P43_005661 359.377