Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02275 AATCTTTTAGTAATGAAAAGAGAAAGAGAGATTGATAGCTTAGCCATGGCCAATCGTTTGGTGCTACTTTCTCGTGAAGGAGGTCAATTTGAGGCATCATATTCGAATTCTTCAAGTTCTAGCCACCGTGTCTTTGAGTGCAAGACCTGCAACCGGCAGTTTCCATCGTTTCAGGCCCTTGGCGGCCACCGCGCCAGCCACAAGAAGCCGCGGTTATCCACCGGAGAAGGGTCACCGGAACTCGATAGCCATGAGCTGGCTCATCATGGCTCGCCAGTGAAACCTAAAACACACGAGTGCTCCATTTGTGGGTTGGAGTTTGCAATAGGGCAAGCTTTGGGAGGCCACATGAGGAGGCATAGAGCAGCAGCTTTGAATGGAAACAAGCAAAACACCAGTGGTTCTGTTACTATGAGTATTAGTAGTAGTGGTAGTAGTTTTGATTCATCTTCTTCACCTCCAAAGAAGAAGGTTGTAAAGGCCAAGAGAGTTTTGTTTGTGGATTTGAACTTGACGCCATTAGAGAATGATTTGCTGGTTTTGGGGATTGGGAAGGCAGCTCCTTTGGTGGATTGCTTCTATTGAATGAAAAGAGAAAGAGAGATTGATAGCTTAGCCATGGCCAATCGTTTGGTGCTACTTTCTCGTGAAGGAGGTCAATTTGAGGCATCATATTCGAATTCTTCAAGTTCTAGCCACCGTGTCTTTGAGTGCAAGACCTGCAACCGGCAGTTTCCATCGTTTCAGGCCCTTGGCGGCCACCGCGCCAGCCACAAGAAGCCGCGGTTATCCACCGGAGAAGGGTCACCGGAACTCGATAGCCATGAGCTGGCTCATCATGGCTCGCCAGTGAAACCTAAAACACACGAGTGCTCCATTTGTGGGTTGGAGTTTGCAATAGGGCAAGCTTTGGGAGGCCACATGAGGAGGCATAGAGCAGCAGCTTTGAATGGAAACAAGCAAAACACCAGTGGTTCTGTTACTATGAGTATTAGTAGTAGTGGTAGTAGTTTTGATTCATCTTCTTCACCTCCAAAGAAGAAGGTTGTAAAGGCCAAGAGAGTTTTGTTTGTGGATTTGAACTTGACGCCATTAGAGAATGATTTGCTGGTTTTGGGGATTGGGAAGGCAGCTCCTTTGGTGGATTGCTTCTATTGAGATCTCTGTAAAGTGTTCTTGATGATATATAGAGAAGTTATTTTCCTTTTTTACACTTTTTTATTTATTTTTCATCTTGGTGATCATATTGTATTTAGATTTTGTTCATTTCTTTAGGACATGAATACATGGTAGTTTTACTTGCA 1304 0.4479 MKREREIDSLAMANRLVLLSREGGQFEASYSNSSSSSHRVFECKTCNRQFPSFQALGGHRASHKKPRLSTGEGSPELDSHELAHHGSPVKPKTHECSICGLEFAIGQALGGHMRRHRAAALNGNKQNTSGSVTMSISSSGSSFDSSSSPPKKKVVKAKRVLFVDLNLTPLENDLLVLGIGKAAPLVDCFY 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02275 190 ProSitePatterns Zinc finger C2H2 type domain signature. 96 116 IPR013087 -
Bach8g02275 190 MobiDBLite consensus disorder prediction 121 149 - -
Bach8g02275 190 PANTHER ZINC FINGER PROTEIN ZAT5 8 172 - -
Bach8g02275 190 MobiDBLite consensus disorder prediction 121 150 - -
Bach8g02275 190 MobiDBLite consensus disorder prediction 56 89 - -
Bach8g02275 190 ProSitePatterns Zinc finger C2H2 type domain signature. 43 63 IPR013087 -
Bach8g02275 190 Pfam C2H2-type zinc finger 40 66 - -
Bach8g02275 190 Pfam C2H2-type zinc finger 94 118 - -
Bach8g02275 190 SMART c2h2final6 41 63 IPR013087 -
Bach8g02275 190 SMART c2h2final6 94 116 IPR013087 -
Bach8g02275 190 ProSiteProfiles Zinc finger C2H2 type domain profile. 41 68 IPR013087 -
Bach8g02275 190 SUPERFAMILY beta-beta-alpha zinc fingers 39 116 IPR036236 -
Bach8g02275 190 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 116 IPR013087 -
Bach8g02275 190 Gene3D Classic Zinc Finger 39 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02275 Bach-Chr8 26126698 26127428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02275 12 181 C2H2 Transcription Factor Family AT2G28710 45.714 1.02e-36 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach8g02275 zf-C2H2_6 9.7e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02275 - - ccaj:109812430 213.386