Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02273 ATGGTTTTATCGAACAAGAAAATAAAACAGAAGCTCAGAGCGGAGCTAGCCGAATCCGCCGCAAAATCGCTGTCGGAAAACAACCCGGACCGGATTCCAGACCAGAATATCTCTCTGAAAAAGCTTGTAGACTCGGGTGAACGAAGACCCAGATTATCAAAGAGAGAAAAACGCCGCTCTTTGAAACCGCCGGAGGCTGCACCGAACGACGGTGTTGGAGCCACCGCCGTTAAGAATAAAGAAGATGAGGGAACGAACGAAGAAGGTTTGGAGGATTCAGGTAGCAAGAAGAAGAACAAAAAGAGAAAGAGAAAACTAGAGGAAAATGGGATTGAGAAGGATACTAAAAAATCAAAGAAGAAAGGTCAGAATAAGAAGAAGAAAAGGAAGAAGCAGCAGAAAAAGACCAAAACAGAAGAAGAAAAGAGTACTAATTCAGTAGTTGAAAACCCAGAAGTGAAAGAGTTAGACAAGAACAATAGCAGTAAAGAAAATGCTGAGGTTTCTACAAAGGTTTATGTTGGAGGGATTCCCTATTATTCAACTGAGGATGATATTCGAAGTTACTTTGAAGGTTGTGGCACCATAACGGAGGTTGATTGCATGACTTTTCCTGAGAGTGGGAAGTTTAGAGGCATTGCCATTATCAGTTTTAAGACTGAAGCTGCAGCAAAACGAGCTTTGGCTCTTGATGGAGCTGACATGGGTGGACTATTTCTTAAAATTCAACCATATAAAGCAACTCGGACCGCTAAAACCTCAGATTTTTCCCCAGAACTGGTGGATGGCTACAATAGAATCTATGTAGGCAATTTGTCATGGGATATAACTGAGGATGAACTGAAGAAATTCTTCTCAGGTTGCATTATATCATTGATACGATTTGGCACGGACAAAGAGACTGGGGAATTCCGAGGATATGCCCATGTTGATTTTGCTGATAGTCAGTCACTTAAAACAGCCCTTACATTGGATCAAAAGGTAGTGTTCGGAAGACCTGTTAGGATAAGTTGTGCAGTTGCTTTGAAGAAGCAGGGAAGCCTTGCAAATTCAGTGCCTTCAACTGCAAGTAAGGGAGTCGAAAGTGTGAAATCAAGTTCCGGTGGAGGGAAGATAAAGAGAAGGACTTGCTACGACTGTGGTGAAAAAGGGCATATTTCTTCAGCTTGTCCTAATCCGAAGAAACAAAATGTTGATTCCACTACAAGTTAA 1212 0.4183 MVLSNKKIKQKLRAELAESAAKSLSENNPDRIPDQNISLKKLVDSGERRPRLSKREKRRSLKPPEAAPNDGVGATAVKNKEDEGTNEEGLEDSGSKKKNKKRKRKLEENGIEKDTKKSKKKGQNKKKKRKKQQKKTKTEEEKSTNSVVENPEVKELDKNNSSKENAEVSTKVYVGGIPYYSTEDDIRSYFEGCGTITEVDCMTFPESGKFRGIAIISFKTEAAAKRALALDGADMGGLFLKIQPYKATRTAKTSDFSPELVDGYNRIYVGNLSWDITEDELKKFFSGCIISLIRFGTDKETGEFRGYAHVDFADSQSLKTALTLDQKVVFGRPVRISCAVALKKQGSLANSVPSTASKGVESVKSSSGGGKIKRRTCYDCGEKGHISSACPNPKKQNVDSTTS 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02273 403 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 76 247 - -
Bach8g02273 403 SUPERFAMILY Retrovirus zinc finger-like domains 363 396 IPR036875 GO:0003676|GO:0008270
Bach8g02273 403 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 172 238 IPR000504 GO:0003723
Bach8g02273 403 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 267 334 IPR000504 GO:0003723
Bach8g02273 403 CDD RRM1_PHIP1 172 243 IPR034361 -
Bach8g02273 403 MobiDBLite consensus disorder prediction 18 165 - -
Bach8g02273 403 Pfam Zinc knuckle 375 392 IPR001878 GO:0003676|GO:0008270
Bach8g02273 403 SMART rrm1_1 171 243 IPR000504 GO:0003723
Bach8g02273 403 SMART rrm1_1 266 337 IPR000504 GO:0003723
Bach8g02273 403 MobiDBLite consensus disorder prediction 76 96 - -
Bach8g02273 403 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 265 341 IPR000504 GO:0003723
Bach8g02273 403 ProSiteProfiles Zinc finger CCHC-type profile. 377 392 IPR001878 GO:0003676|GO:0008270
Bach8g02273 403 MobiDBLite consensus disorder prediction 351 403 - -
Bach8g02273 403 MobiDBLite consensus disorder prediction 134 164 - -
Bach8g02273 403 SUPERFAMILY RNA-binding domain, RBD 166 246 IPR035979 GO:0003676
Bach8g02273 403 Gene3D - 355 402 - -
Bach8g02273 403 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 170 247 IPR000504 GO:0003723
Bach8g02273 403 SUPERFAMILY RNA-binding domain, RBD 258 344 IPR035979 GO:0003676
Bach8g02273 403 MobiDBLite consensus disorder prediction 119 133 - -
Bach8g02273 403 SMART c2hcfinal6 376 392 IPR001878 GO:0003676|GO:0008270
Bach8g02273 403 Gene3D - 260 347 IPR012677 -
Bach8g02273 403 Gene3D - 109 255 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02273 Bach-Chr8 26093438 26096628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02273 169 368 Eukaryotic Initiation Factors Gene Family AT3G16380 28.125 6.14e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02273 - - adu:107467708 405.216