Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02225 ATGGCCAGAGACAGTAACAAGCTATACGTCAATGTTCCGAGCCTCTTCCAGTGCCCTATTTCCATGGACGTGATGAGGTCTCCGGTGAGCCTCTGTACCGGTGTCACATACGATCGCTCCAGCATCCAGAACTGGCTTGACTCCGGTCACGATACGTGTCCTGCCACCATGCAAGTACTTCCCTCCAAGGAATTCATCCCCAACCTTACCGTTCACCGCCTCATCAACCTTCGGCTCCACTCCGGCGACTGCTCATTGGCCTCTCTGTTGTCTTCAGCGGCGCCGCCTTCTCCTTCCTCTGTCTCAACTGAGGATGTTCGGGATCTAATCCGCAGAATGGAAAACGACAATGAAGATATCGCTGTCTTGCTTCCGAAGATTCTCAAATTCGCAAGTTATTCAGACGAGAATCGGCGGTTGTTAGCCAGTTTTGCTGGCTTTGATTCTGTAGTCGTTGGGATTTTCACCAGGAATAGCTCTATGATTGGCGTTCTGGAAACGGCGATTAGAATTCTGGGTTTGATTATGCGAGAAAGTGAAGCCAAAGAACGAATTCGCGCTCTGATTTTTGACGCAAGTCGCGATTTCTTATCTTCGTTGGTCTCCATTCTGCAAAACGGCGTTGTAAGCTCGAAGATCGAAACGCTGAGGGTTTTGGCATCGTTGGCCGGAGACGTCCAATCGAAGCGTTCAATAGTCGAAACGCCAGGCCTATCATCCGTACAGTTAAAGCTACTCCAGTCAGATAACGAAACCAGCGCAGAACTACACGACGCCGTTTTATCGTGCTTGATAGCCGTTTCTACGACTCAGTCAACCAAGACGCAACTCATCTGGGTCGGACTCATTCGGGTTTTATCTGATATGCTCCAGAACCCGACCTGCAGCAAATCAACTACCGAGAACTGTCTGAAACTACTGGCAACGTTTTCTACCTGTGCTGAAGGGAGGTCGGCAATCAGCGAAGAGCGGAAGTGCGTGGAGGCCATAGTGGAGAAACTGGTGAAGGTGACAAGCGCGGCGGCGGAGGACGCGGTGGCGGTGCTTTGGAATATTTGCTGCTTGTCGAGGAATTTGAAGGTACAGGAGGAGGTGGCGAAGGGAAATGGCGTAACAAAGATACTTCTGGTGCTGCAGAGAGACTGTCAGGAGCACGTGAAGAAGATGTGTAGAGATTTAGTTAAGGTTCTTAGGGCTGTGTGCAAGGTTGATTTGGGGAGCTACGAGACCCAAACCACTCACATCAAATCTTGCTGA 1257 0.5036 MARDSNKLYVNVPSLFQCPISMDVMRSPVSLCTGVTYDRSSIQNWLDSGHDTCPATMQVLPSKEFIPNLTVHRLINLRLHSGDCSLASLLSSAAPPSPSSVSTEDVRDLIRRMENDNEDIAVLLPKILKFASYSDENRRLLASFAGFDSVVVGIFTRNSSMIGVLETAIRILGLIMRESEAKERIRALIFDASRDFLSSLVSILQNGVVSSKIETLRVLASLAGDVQSKRSIVETPGLSSVQLKLLQSDNETSAELHDAVLSCLIAVSTTQSTKTQLIWVGLIRVLSDMLQNPTCSKSTTENCLKLLATFSTCAEGRSAISEERKCVEAIVEKLVKVTSAAAEDAVAVLWNICCLSRNLKVQEEVAKGNGVTKILLVLQRDCQEHVKKMCRDLVKVLRAVCKVDLGSYETQTTHIKSC 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02225 418 Pfam U-box domain 12 76 IPR003613 GO:0004842|GO:0016567
Bach8g02225 418 FunFam RING-type E3 ubiquitin transferase 12 83 - -
Bach8g02225 418 Gene3D - 84 410 IPR011989 -
Bach8g02225 418 SMART Ubox_2 15 78 IPR003613 GO:0004842|GO:0016567
Bach8g02225 418 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 83 IPR013083 -
Bach8g02225 418 PANTHER WDSAM1 PROTEIN 11 400 IPR045185 GO:0061630
Bach8g02225 418 CDD RING-Ubox_PUB 13 65 IPR045210 -
Bach8g02225 418 SUPERFAMILY RING/U-box 3 76 - -
Bach8g02225 418 SUPERFAMILY ARM repeat 165 397 IPR016024 -
Bach8g02225 418 ProSiteProfiles U-box domain profile. 11 85 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02225 Bach-Chr8 24996111 24997367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02225 1 415 U-box Gene Family AT3G18710 41.395 8.96e-95 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02225 - - qsa:O6P43_008115 471.085