Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02217 ATGTCCCTTAAGATAGCTTTAGATATTCTATGTTTTCCAGTAGCAATTTTACTGCTTTTGTGCACATATAAGGAATATAAGTATGAACACACCGATAGAGAGATCAGTGAAATCCTTTATACCCCTTTAAATGGTGAGTCCAATGGCATTGGTAAAATTAGTTCTGTTGAATGTGTAACACCATTTGCCAGAGCTGGGTTCTTCAATAAGATGTCATTTTGGTGGTTGAATCCATTGATGAAAACCAGTAAGGAGAAAACACTTAAGGATGAAGATATCCCAAAGTTGGGTGAGGCAGATCGAGCAGAAAATGGTTATTTGCTGTTTCTGGACCAACTGAACAAACAGAAACAGAAAGGACCATTATCGGAGCCTTCAATTTTAAGGACAATAATTTTATGCCATTGGAGAGACATTTTGATAACTAGTTTCTTTGCATTGCTAAAGGTACTCACCATTTCTGCTGGTCCTCTACTTCTGAATTCCCTTATATTGGTAGCTCAGGATAAAGAGAGTTTCAAATATGAAGGTTATGTATTGGCCATATTACTTTTCTTTACAAAGTCCATAGAATCCTTATCACAAAGGCAGTGGTACTTTCGTAGCAGACTCATTGGTTTGAAAGTCAAATCATTGCTTACTGCTGCCATCTATAAGAAGCAGCTGAGATTATCCAATGCTTCCAGGTTGGTACATTCTGGTGGTGAGATAATGAATTATGTGACTGTAGATGCATATAGAATTGGAGAATTCCCATTTTGGTTTCACCAGACTTGGACAACAAGCCTCCAACTATGTATTGCTTTAGTAGTTCTTTTCCATGCTATTGGACTAGCAACAATAGCTTCCTTAGTGGTGATAGTTATCACTGTGCTTTGCAATACTCCACTTGCTAAGTTACACCATAAATTTCAGAGCAAACTTATGGCGGCCCAAGATGAGAGATTGAGGGCTAGTTCTGAGGCTCTTGTGAATATGAAATCTGCTGCCTTTTCATGGGAAGAAAATGAATCAAGGCCCACACTGAGAAACATAAATTTAGAGGTTAAACCTGGGGAAAAGGTGGCTATATGCGGTGAAGTTGGTTCAGGAAAATCAACCGTCTTAGCAGCAATTCTTGGAGAAGTTCCACATACACAGGGAGCTATTGAAGTTTATGAAAAGTTTTCCTATGTCTCTCAAACAGCTTGGATACAAAGTGGCAGCATACAAGATAATATACTGTTTGGATCAGCTATGGATGCAAAAAGATATCAAGAAACACTTGAGAGGTCTTCGTTAATGAAAGATCTTGAGTTGTTTCCCCATGGTGATCTCACCCAAATAGGGGAAAGAGGAGTTAACCTGAGTGGAGGTCAGAAGCAACGAATTCAACTTGCTCGTGCCCTTTATCAGAATGCTGACATATGTCTGTTGGATGATCCATTCAGTGCTGTTGATGCACAAACTGCCACAAATTTGTTTGATGAATATGTCATGAAAGGACTTAGAAGGAAGCCAGTGTTACTTGTGACTCATCAAGTTGACTTCCTTCCAGCGTATGATTCTGTTTTGTTAATGTCTGATGGGGAAATCCAACAAGCTGCTCCTTATCACCATCTATTGTCCTCAAGCCAAGAATTTCAGGATCTTGTCAGTGTTCACAAGGAGACTGCTGGTACTGAAAGGCTTGCAGATGTTACTTCTGCACAGAAACGCACAAATTCTACAAAAGAATCTGAGAAAGCTTATGTGGATAAGCAGTTTGAAGTGTCAAAAGCGGATCATTTAATTAAGAAAGAAGAAAGAGATATTGGAGACACTGGGTTCAAGCCTTACTTGCAGTATCTGAATCAGAACAGAGGTTGTATATACTTCTCTGTTGCTGCCCTTAACTTGCATTTGTGA 1887 0.3916 MSLKIALDILCFPVAILLLLCTYKEYKYEHTDREISEILYTPLNGESNGIGKISSVECVTPFARAGFFNKMSFWWLNPLMKTSKEKTLKDEDIPKLGEADRAENGYLLFLDQLNKQKQKGPLSEPSILRTIILCHWRDILITSFFALLKVLTISAGPLLLNSLILVAQDKESFKYEGYVLAILLFFTKSIESLSQRQWYFRSRLIGLKVKSLLTAAIYKKQLRLSNASRLVHSGGEIMNYVTVDAYRIGEFPFWFHQTWTTSLQLCIALVVLFHAIGLATIASLVVIVITVLCNTPLAKLHHKFQSKLMAAQDERLRASSEALVNMKSAAFSWEENESRPTLRNINLEVKPGEKVAICGEVGSGKSTVLAAILGEVPHTQGAIEVYEKFSYVSQTAWIQSGSIQDNILFGSAMDAKRYQETLERSSLMKDLELFPHGDLTQIGERGVNLSGGQKQRIQLARALYQNADICLLDDPFSAVDAQTATNLFDEYVMKGLRRKPVLLVTHQVDFLPAYDSVLLMSDGEIQQAAPYHHLLSSSQEFQDLVSVHKETAGTERLADVTSAQKRTNSTKESEKAYVDKQFEVSKADHLIKKEERDIGDTGFKPYLQYLNQNRGCIYFSVAALNLHL 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02217 628 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 327 623 - -
Bach8g02217 628 Pfam ABC transporter 342 476 IPR003439 GO:0005524
Bach8g02217 628 FunFam ABC transporter C family member 10 123 346 - -
Bach8g02217 628 SUPERFAMILY ABC transporter transmembrane region 128 335 IPR036640 GO:0005524|GO:0016020
Bach8g02217 628 FunFam ABC transporter C family member 5 310 555 - -
Bach8g02217 628 CDD ABC_6TM_ABCC_D1 141 335 IPR044746 GO:0140359
Bach8g02217 628 CDD ABCC_MRP_domain1 324 524 - -
Bach8g02217 628 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 324 547 IPR003439 GO:0005524
Bach8g02217 628 Gene3D - 293 573 IPR027417 -
Bach8g02217 628 SMART AAA_5 351 524 IPR003593 GO:0016887
Bach8g02217 628 Pfam ABC transporter transmembrane region 140 358 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bach8g02217 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 322 546 IPR027417 -
Bach8g02217 628 ProSitePatterns ABC transporters family signature. 449 463 IPR017871 GO:0005524|GO:0016887
Bach8g02217 628 Coils Coil 626 628 - -
Bach8g02217 628 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 140 327 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02217 Bach-Chr8 24492655 24496455 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02217 319 573 Calmodulin-binding Proteins AT2G36910 28.832 9.28e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02217 K05666 - qsu:112002032 518.464