Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02216 ATGGCTGTTAATGTTGATGATCCTCATGTTAACACATTGCAGTTAATACTAGTGTACTTGTTGATTGGAATTATTTCAACTCTTTTCTTGTTGATCAGTCGTCTTGCTGTTGTTGCTATGGGTATTCAATCTTCAAGATCTTTATTTTCAGAGTTACTGAACTCCCTTTTTCGAGCACCAATGTCATTTTATGATTCCACTCCTTTGGGAAGGATTCTTAGTAGGGTCTCGGCAGATCTGAACATTGTCGACCTTGATGTCCCATTCAGCCTCTTGTTTGCTGTTGGAGCCACATTAAATTGTTCTGCTAGTCTTACAGTTTTAGCAGTTATTACCTGGCAAGTGTTGTTTGTGTCCATACCTATAGTTTATATTGCGATTCGCTTGCAGAAATATTACTTTGCCTCTGTGAAAGAACTTATGCGGATGAATGGCACCACAAAATCCTTTGTAGCTAATCATCTAGCTGAATCTGTAGCTGGAGCCGTGACAATAAGGGCTTTTGAGGAGGAAGATCGCTTTTTCACAAAAGATCTTGACCTCATTGATGTCAATGCCAGTCCTTTCTTCTACAGTTTTGCAGCAAACGAGTGGTTGATTCAACGATTAGAAATAATCAGTGCTGTTGTTCTTGCCTCTGCTGCCTGTTGCATAGTTGTGCTTCCACCTGGGACTTTCACCTCTGGATTTATTGGCATGGCTCTCTCATATGGACTTTCATTAAACATGTCCCTTGTATATACAATACAAAACCAGTGCACCATAGCAAATTATATAATATCAGTTGAGAGGCTAAATCAATATATGCATATATCAAGTGAGGCCCCAGAAGTCATAGAAGGAAATCGTCCTCCTATAAATTGGTCAGCTGTGGGAAAAGTTGTGATAAATGATCTGCAGATACGATACCAGCCAGGTGCACCTCTTGTACTTCGTGGGATCACATGCACATTCCAAGGAGGGCACAAGATTGGTATTGTTGGTAGGACAGGCAGCGGGAAATCCACTCTAATCAGTGCTTTATTCCGTCTTGTGGAGTTAGCAGGCGGAGAGATTATCATTGATGGCATTGACATTTCTTCTATTGGACTTCATGATTTGAGGTCACGTTTTAGTGTTATACCTCAAGATCCTACTCTTTTTAATGGGACAGTCAGATATAATTTGGACCCTTTGTCTCAACATTCTGATGAGGAGATATGGGAGGTCCTTGGAAAGTGTCAGTTGTTCGAGATTGTGAACGAAAAAGAAAGGGGCTTAGACTCCTTAGTTGTGGAAGATGGATCAAACTGGAGCATGGGAAAACGACAGTTATTTTGTTTGGGGCGTGCTTTTCTGAGGAGAAGTCGGATATTGGTGCTTGATGAAGCAACTGCATCAATTGATAAGGCAACTGATTTGATTCTGCAGAAAACCATTAGGACTGAGTTTGCAGATTGTACTGTAGTCACAGTTGCCCATAGAATACCAACTGTGATGGATTGCACTAAGCAGCATCTAGTTCCTTAA 1509 0.4089 MAVNVDDPHVNTLQLILVYLLIGIISTLFLLISRLAVVAMGIQSSRSLFSELLNSLFRAPMSFYDSTPLGRILSRVSADLNIVDLDVPFSLLFAVGATLNCSASLTVLAVITWQVLFVSIPIVYIAIRLQKYYFASVKELMRMNGTTKSFVANHLAESVAGAVTIRAFEEEDRFFTKDLDLIDVNASPFFYSFAANEWLIQRLEIISAVVLASAACCIVVLPPGTFTSGFIGMALSYGLSLNMSLVYTIQNQCTIANYIISVERLNQYMHISSEAPEVIEGNRPPINWSAVGKVVINDLQIRYQPGAPLVLRGITCTFQGGHKIGIVGRTGSGKSTLISALFRLVELAGGEIIIDGIDISSIGLHDLRSRFSVIPQDPTLFNGTVRYNLDPLSQHSDEEIWEVLGKCQLFEIVNEKERGLDSLVVEDGSNWSMGKRQLFCLGRAFLRRSRILVLDEATASIDKATDLILQKTIRTEFADCTVVTVAHRIPTVMDCTKQHLVP 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02216 502 CDD ABCC_MRP_domain2 292 497 - -
Bach8g02216 502 Pfam ABC transporter transmembrane region 6 231 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bach8g02216 502 FunFam Multidrug resistance-associated protein member 4 278 501 - -
Bach8g02216 502 Pfam ABC transporter 311 459 IPR003439 GO:0005524
Bach8g02216 502 CDD ABC_6TM_ABCC_D2 4 269 IPR044726 GO:0140359
Bach8g02216 502 Gene3D - 278 501 IPR027417 -
Bach8g02216 502 Gene3D ABC transporter type 1, transmembrane domain 2 275 IPR036640 GO:0005524|GO:0016020
Bach8g02216 502 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 257 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bach8g02216 502 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 14 497 - -
Bach8g02216 502 SMART AAA_5 320 491 IPR003593 GO:0016887
Bach8g02216 502 FunFam ABC transporter C family member 5 1 275 - -
Bach8g02216 502 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 294 501 IPR003439 GO:0005524
Bach8g02216 502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 285 496 IPR027417 -
Bach8g02216 502 SUPERFAMILY ABC transporter transmembrane region 11 277 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02216 Bach-Chr8 24489681 24492628 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02216 263 495 Calmodulin-binding Proteins AT2G36910 27.119 3.71e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02216 K05666 - gmx:100811468 842.417