LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach8g02171	ATGGAGAAACAAGGGTCTTTGAAGTACCTTATGGTTGGGATTCTGCAGAAAGCTCATCAAGAATCATCTGCTGCCCAAACAGGAACCCTTCTAATGAATACTTCTTCAGATGCCGCTGCTATTGACTTATCTCTCTGCCTTAGTTTCCCAAACCACACACTAGCCGCAGCCTTGCCTTCTTCAATTGCTTGTTCTTCTTGTGTCCAAGAAAACCAAAAGGAACTCTCCAGTTTTCTCTGTAGTCGTTTGGTTTCTTCTCAAAAGTACGCAAAAGTGGAAAAGAGTCAGAAGGAAACTCATGTCTGTACCGAGTTATCACTTTCAATTTCAAGCAGCTTCAGTGATGGCCAAAACAAAGTCGATCCCTCTCATGTATCAAACAAGAGGAAACCTAGTCCTAACCCTCCCAAGAATGCGGTCAAGAAAACTCGTGGAAGTGGAAGAATCCAAGAAGAGATGCAGTGGGGCTATTCAACAGATTTAAAACTGTACGAAGACCCTTGGAAAATCAAGAAAGCCCTCACTGAAAGTGATCTTGGCAGCTTATGCCGACTCTTGTTGGCCACTGACTTAGTTGAGAAACTGGTGCTACCCATGTTGGGTGTTGATGCCAAGAGAGATGCTAATACACTTGAGAAAGGAATCCAGATTGGAATTTGGGATGTGGACACTGAAACTATGCACTATCTGATTCTGAAGTATTGGGTTTCTTCAAAGAGTTATGTTTTGATTGGAAGGTGGAACTCGGAATTTGTGAAGAGAAGATGTTTGAACAAGGGAGATGAGATTGGGCTTCATTTTGATCCTTACAAGCTCCATTTTGATTTATCTGTTCTTAAGCGTGCTACCCGTGTTGGGTGTTGA	864	0.4259	MEKQGSLKYLMVGILQKAHQESSAAQTGTLLMNTSSDAAAIDLSLCLSFPNHTLAAALPSSIACSSCVQENQKELSSFLCSRLVSSQKYAKVEKSQKETHVCTELSLSISSSFSDGQNKVDPSHVSNKRKPSPNPPKNAVKKTRGSGRIQEEMQWGYSTDLKLYEDPWKIKKALTESDLGSLCRLLLATDLVEKLVLPMLGVDAKRDANTLEKGIQIGIWDVDTETMHYLILKYWVSSKSYVLIGRWNSEFVKRRCLNKGDEIGLHFDPYKLHFDLSVLKRATRVGC	287

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach8g02171	287	Gene3D	-	167	281	IPR015300	-
	Bach8g02171	287	MobiDBLite	consensus disorder prediction	111	147	-	-
	Bach8g02171	287	SUPERFAMILY	DNA-binding pseudobarrel domain	167	274	IPR015300	-
	Bach8g02171	287	PANTHER	TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED	123	281	-	-
	Bach8g02171	287	MobiDBLite	consensus disorder prediction	111	133	-	-
	Bach8g02171	287	CDD	B3_DNA	168	280	IPR003340	GO:0003677

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach8g02171	Bach-Chr8	23119427	23120290	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach8g02171	170	263	RAV Transcription Factor Family	AT1G68840	35.789	1.00e-06	47.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach8g02171	-		-	pvu:PHAVU_009G204600g	178.333