Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02146 ATGAATGACCTGTTCGCCGGATCCTTCTCCCGCTTCCGTAGCGAGGAAGCGTCGCCGGGTCGAGATCACCATGTCATAGAGATGAGTGCTGCGACGGCGTCCACCGGTGGAGTCAACCTCGATAAGTTCTTCGGGGATGTGGAGTCGATCAAGGAGGAGCTCCAGGAGCTGGAGCGCCTCAACCAAAATCTCCGTGACTCACACGAGCAGAGCAAGACACTCCACAATGCCAAAGCCGTGAAGGACCTTCGCTCACGCATGGACAACGATGTTGGCCTTGCTCTCAAGAAAGCGAAGATCGTCAAGGTCAAATTGGAGGCTCTCGAGCGATCCAACGCCGCCAACCGGAGCCTTCCCGGATGCGGACCTGGGTCATCATCCGACCGTACCCGCACCTCCTTGGTCAACGGCTTGAAGAAGAAGCTAAAGGACTCCATGGAGAGCTTCAATAACCTCAGGCAGCAGATCTCGTCGGAGTATAGGGAGACCGTACAACGTAGGTATTTCACCGTCACCGGCGAGAATCCAGATGAGAAGACCCTTGACCTCTTGATCTCTACAGGTGAGAGTGAGACCTTCCTTCAGAAAGCCATTCAAGAACAGGGTAGAGGTAGGATTCTGGATACCATCAATGAAATTCAAGAAAGGCATGATGCCGTAAAAGAGATTGAGAAGAACCTGAAGGAGTTGCATCAAGTGTTCCTTGACATGGCAGTATTGGTGGAAGCACAAGGTGAGCAATTGGACGATATTGAAAGCCATGTTGGAAGAGCAAGCTCATTTGTGAGGACTGGAGCGGAGCAGTTGGGGGTTGCAAGGAAGCACCAGAAGAACACCAGGAAATGGACTTGTTACGCTATTATACTTCTGCTAGTGATCATCTTGTTAGTGGTGCTCTTCACTGTGAAACCATGGCAAAATAATGGTAATGGTGGCAACAATAATAGTCAACCGGCTCCGGCTCAAACACCTCCTCCTCCTCCTGCTTAATCTTGGTGATTAAGAGCCTGTAAGTTCTAAACGGTGATTCTTGTGGTTTCACTTGTTTCCGTTTGAAACTTAACCTGCCCTGTTTTTGGATCCCGTGAGGGTGAGACTAAAATGGATTAGCACATTATGAGGAAGTTCTGTAGAGTGACCTTCAGCAGTTTTACATGAATTATTATTATTATTTTTTTAATCCATAGGTAGAGGGGTACTAAGGATTTCAACCTTACCAGATGAGGAGGATTGAACCTGAAGGATCAGCTGATAGGTGCTTACCATTAAGCTAAATCTCACTTGGCATTTTATATCGATTCATTCATGGAAAGTTAGGATGACAATTCTACATCTACAATCTGGGAAGGTAGAAATTCTGTCAAGTTTGATTCGTTGGGGAACATAGATTAATATTTTGGGAATGAAATTCTTTTTCTGTAAGTATATTATCTGGCGGATCAGTTTCATTGCTGTTTTGTAGTTTGTGTATTCTTTACAG 1480 0.4635 MNDLFAGSFSRFRSEEASPGRDHHVIEMSAATASTGGVNLDKFFGDVESIKEELQELERLNQNLRDSHEQSKTLHNAKAVKDLRSRMDNDVGLALKKAKIVKVKLEALERSNAANRSLPGCGPGSSSDRTRTSLVNGLKKKLKDSMESFNNLRQQISSEYRETVQRRYFTVTGENPDEKTLDLLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKEIEKNLKELHQVFLDMAVLVEAQGEQLDDIESHVGRASSFVRTGAEQLGVARKHQKNTRKWTCYAIILLLVIILLVVLFTVKPWQNNGNGGNNNSQPAPAQTPPPPPA 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02146 329 SUPERFAMILY t-snare proteins 38 265 IPR010989 GO:0016020|GO:0016192
Bach8g02146 329 MobiDBLite consensus disorder prediction 309 329 - -
Bach8g02146 329 Gene3D - 207 303 - -
Bach8g02146 329 PANTHER SYNTAXIN 50 293 IPR045242 -
Bach8g02146 329 Coils Coil 210 230 - -
Bach8g02146 329 Coils Coil 135 159 - -
Bach8g02146 329 SMART SynN_4 35 161 IPR006011 GO:0016020
Bach8g02146 329 CDD SynN 40 197 IPR006011 GO:0016020
Bach8g02146 329 Coils Coil 40 77 - -
Bach8g02146 329 Pfam Syntaxin 42 245 IPR006011 GO:0016020
Bach8g02146 329 ProSitePatterns Syntaxin / epimorphin family signature. 216 255 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bach8g02146 329 Gene3D - 38 170 - -
Bach8g02146 329 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 37 167 - -
Bach8g02146 329 Pfam SNARE domain 246 298 IPR000727 -
Bach8g02146 329 CDD SNARE_syntaxin1-like 209 269 - -
Bach8g02146 329 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 210 272 IPR000727 -
Bach8g02146 329 FunFam Syntaxin 132 203 303 - -
Bach8g02146 329 SMART tSNARE_6 205 272 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02146 Bach-Chr8 22395501 22397341 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02146 28 329 SNARE and Associated Proteins AT3G11820 75.484 2.31e-160 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02146 K08486 - qsa:O6P43_006031 508.834