Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02070 ATGGAGCAGCAAGAAGAGCATGAAGTGTACGGAGGAGAAATTCCCGACGATGGTGAGATGGACGCAGACTTGGAGATGTCTGCTAGGGTTGAAGATGGAGAAGACGACCATGGCGATCCCTATAACCCAAACAAGGACTTGGAGGACATGAAGAAGAGGCTCAAGGATATTGAAGAAGAAGCTGGTGCCCTTCGCGAAATGCAGGCCAAGGTTGAGAAAGAGATGGGTCTTGTTCAAGATTCAACGGGTTCTTCTGCAAGTCAGGCTGAAAAGGAGGAGGTGGATTCTCGATCAATCTATGTTGGTAATGTTGACTATGTATGTACACCTGAGGAAGTCCAACAGCATTTTCAGTCCTGTGGAACTGTGAACAGGGTGACAATATTGACAGACAAGTTTGGTCAACCTAAAGGATTTGCTTATGTTGAGTTTGTTGAGATTGATGCTGTTCAGAATGCTCTTCTGTTGAATGAATCAGAATTGCATGGTCGACAATTGAAGGTCTCTGCTAAACGTACTAACGTTCCTGGAATGAAGCAGTATCGTGGAAGAAGACCTGTTGGTATACAATCTAGAAGACCTTTCATGCCTTCTCCGTTCTATCCTCCATATGCATATGGACGAGTTCCAAGGTTTAGGCGATTGACTCGGTATAGGCCATACTAG 666 0.4505 MEQQEEHEVYGGEIPDDGEMDADLEMSARVEDGEDDHGDPYNPNKDLEDMKKRLKDIEEEAGALREMQAKVEKEMGLVQDSTGSSASQAEKEEVDSRSIYVGNVDYVCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPVGIQSRRPFMPSPFYPPYAYGRVPRFRRLTRYRPY 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02070 221 CDD RRM_II_PABPs 98 169 - -
Bach8g02070 221 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 5 184 - -
Bach8g02070 221 MobiDBLite consensus disorder prediction 1 49 - -
Bach8g02070 221 MobiDBLite consensus disorder prediction 22 49 - -
Bach8g02070 221 SUPERFAMILY RNA-binding domain, RBD 87 194 IPR035979 GO:0003676
Bach8g02070 221 Coils Coil 47 74 - -
Bach8g02070 221 SMART rrm1_1 98 169 IPR000504 GO:0003723
Bach8g02070 221 Gene3D - 41 170 IPR012677 -
Bach8g02070 221 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 99 167 IPR000504 GO:0003723
Bach8g02070 221 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 97 173 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02070 Bach-Chr8 18088269 18094626 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02070 98 169 Eukaryotic Initiation Factors Gene Family AT2G36660 36.842 1.80e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02070 K14396 - qsa:O6P43_008768 388.267