Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g02038 ATGGGAAGACTAATGGCGGCAAGTGCAATCAGCAAAATTCCATTATTATGCTTGGCTACTTTCGCCATTACAATTCCATGCCTCGAGGCTGGTCTTGTTGAGTATGATGACTTTATCCGGAAACTAGAAGAGGATGCCGAGGAAGCAGCTTCAGAGGCATACGAGCCCTATCCTTTGAATGTCACTCAAGAGCTCAATCTACACGTTCACTTGGCATTACAGGAGCACCAGCAGGAGAGGGAGATGAGCAGAAATAGCACCAGGAGAGACATGAGACAGATAAAGAAGGCGAAAGGACCATGCAAGGCCACCAATCCAATTGACCGTTGCTGGCGGTGCCGGCCAGACTGGGCCAATGATCGCTTTAGATTAGCCCATTGTGTGAAGGGATTCGGGCGAAAGACCACCGGCGGACTTGGTGGTCCGATCTACGTGGTGACGGATCCCTCTGATGACAACATGTTGAACCCAAAGCCGGGAACTCTCCGGCATGCAGCGATCCAGAATGGACCATTGTGGATTATCTTCCAACGTAGCATGGTGATCCATCTGCAGCAGGAATTGCTAATAACATCTCACAAGACCATTGATGGTCGCGGGGCCAATGTCCAGATTAAGGGTGGGGCTGGCCTTTCCATATTTTACACTCAAAACATTATTATTCATAACCTTCGCATTAAGAATACCCGTTCTGCAAGTGGTGGTGACATTGCCGACGCTTGGAATCACCATGGAATTAGAACAAGGAGTGATGGAGATGCCATTTCCGTCTTTGGTGGTGCTAACATTTGGATTGATCATATTTCCATGTCCGATTGTGAGGATGGTCTTGTTGATGTCATACAGGGTTCTACTGGTGTCACCATCTCTAACTGCCACATGACCCATCACAATGATGTGATGCTGTTTGGTGCAAGTGATTTCTACGACGGAGACAAAAGAATGCAGGTGACAGTGGCATTCAACCACTTTGGACAGGGATTAATTCAGAGGATGCCTAGATGCAGATGGGGTTTCGTTCATGTTGTCAACAATGACTACACTCACTGGCAGATGTATGCAATTGGTGGTAGCTCTAGCCCAACCATTCTCAGCCAGGGCAACCGATTCATTGCTCCTCCAAATGACGCGGCAAAGGAGATCACACACAGAGATTATGCACCAGAATCAGTCTGGAGTAAGTGGCAGTGGAGATCAGAGATGGACCTATTCATGAATGGAGCAAAGTTTACTGAGTCTGGAGCACCGTTTTTCCTTCATTATCCAGTTCCCAAAGGCAACCTTATCAAACCCAGACATGGAAAGTTTGTTACTAGGCTTACAAGGTTCAGTGGTGCACTCCCCTGCAAGGTTGGCCAGCCTTGTTAG 1368 0.4781 MGRLMAASAISKIPLLCLATFAITIPCLEAGLVEYDDFIRKLEEDAEEAASEAYEPYPLNVTQELNLHVHLALQEHQQEREMSRNSTRRDMRQIKKAKGPCKATNPIDRCWRCRPDWANDRFRLAHCVKGFGRKTTGGLGGPIYVVTDPSDDNMLNPKPGTLRHAAIQNGPLWIIFQRSMVIHLQQELLITSHKTIDGRGANVQIKGGAGLSIFYTQNIIIHNLRIKNTRSASGGDIADAWNHHGIRTRSDGDAISVFGGANIWIDHISMSDCEDGLVDVIQGSTGVTISNCHMTHHNDVMLFGASDFYDGDKRMQVTVAFNHFGQGLIQRMPRCRWGFVHVVNNDYTHWQMYAIGGSSSPTILSQGNRFIAPPNDAAKEITHRDYAPESVWSKWQWRSEMDLFMNGAKFTESGAPFFLHYPVPKGNLIKPRHGKFVTRLTRFSGALPCKVGQPC 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g02038 455 SMART amb_all 179 376 IPR002022 -
Bach8g02038 455 MobiDBLite consensus disorder prediction 76 100 - -
Bach8g02038 455 Pfam Pectate lyase, N terminus 34 90 IPR007524 GO:0030570
Bach8g02038 455 PANTHER PECTATE LYASE 18-RELATED 47 453 IPR045032 GO:0030570
Bach8g02038 455 MobiDBLite consensus disorder prediction 76 97 - -
Bach8g02038 455 Pfam Pectate lyase 188 370 IPR002022 -
Bach8g02038 455 SUPERFAMILY Pectin lyase-like 105 446 IPR011050 -
Bach8g02038 455 PRINTS Pollen allergen Amb family signature 251 272 IPR018082 -
Bach8g02038 455 PRINTS Pollen allergen Amb family signature 395 419 IPR018082 -
Bach8g02038 455 PRINTS Pollen allergen Amb family signature 426 449 IPR018082 -
Bach8g02038 455 PRINTS Pollen allergen Amb family signature 187 203 IPR018082 -
Bach8g02038 455 PRINTS Pollen allergen Amb family signature 353 372 IPR018082 -
Bach8g02038 455 PRINTS Pollen allergen Amb family signature 151 176 IPR018082 -
Bach8g02038 455 PRINTS Pollen allergen Amb family signature 331 350 IPR018082 -
Bach8g02038 455 PRINTS Pollen allergen Amb family signature 127 144 IPR018082 -
Bach8g02038 455 Coils Coil 32 52 - -
Bach8g02038 455 Gene3D - 104 448 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g02038 Bach-Chr8 17047402 17049166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g02038 21 455 Polysaccharide Lyase AT1G14420 54.382 3.05e-179 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g02038 K01728 - gmx:100810615 622.854