Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01993 GCAATTTGCAAGTGGTTGATAGAGCTCTTGTCCAGCTTTACTTGGAATCATTCATTGCCCTTCTGGGATTTAGCCCTCTATGCTGCTCTTTCTCTCCCTCTCGATCTCAAAGTTTTCACCTTTCTCGCTCCACAACAGAACATTTCTCGGAAGATAGCAGCCAGAGAATAAAATGTCTGAATCGGAGGAAGAAAATCCCGAACTTGCTCCCAAGTCAAAGCCAGATCCTGAGTGCGTCATGGAATTCGATCTCGACCTAGAAAGCTCTTGGCCCTTTGATCAGATTTCCTATATGTGCAACCCCATGTCTCCATTTCTTATCCCTCCCTCGTCTGAGCAACCTTCGTCTCCTATCTTGGCTTTCTCCGACGTAGACGATGACAGACACGCAAGAGTTTCCGCCGCGCCTTTCTCGGATTGCAAAAGATTCTTTTCCTGCAATTCAAATTCAAGACCTGAAGGGCCAACTGAAAATGATGATGGCAAAAAAATTTTGTCACCCTTTGTGGCTTTGCCATTGTTAGAAAATCCAGATGGGTATTGTCTAATCAAAGAAAGGATGACACAAGCACTTCGGTATTTCAAAGAGTTGACTGAACAGAGTGTCCTGGCTCAGGTTTGGGCACCTGTGAGGAATGGGAATCGGTATGTGCTTACAACTTCAGGGCAACCCTTCGTTCTTGATTCACATAGTAATGGACTCCATCAGTATAGAACAGTATCTCTGATGTACCTGTTTTCTGTGGATGGGGAGAGTGATGGAACCCAGGGACTTCCAGGTCGTGTTTTTCAGCATAAGTTGCCAGAATGGACTCCTGATGTTCAGTATTACTCTAATAGAGAATATCCACGCAGAGACCATGCTCAGCACTTCAATGTTCATGGATCCTTGGCTTTGCCTGTGTTTGAACCTTCTGGACAATCATGTGTTGGTGTGCTAGAGTTGATAATGACTTCACAGAAGATTAACTATGCCCCAGATGTTGATAAAGTCTGCAAAGCTCTTGAGGCAGTAAATTTGAGGAGCTCAGAAATTTTGGACCATCTAAACACACAGATTTGTAATGAAGGACGCCAAAATGCATTAGCAGAGATTTTGGAGATATTGACTGTGGTGTGCGAAACTCATAAATTACCTCTGGCCCAAACTTGGGTTCCCTGCAGGCATCGTAGTGTTCTGGCCCATGGTGGTGGTGTGAAGAAGAGCTGCTCTAGCTTCGATGGTAGCTGCATGGGACAAGTTTGCATGTCAACAAGTGATGTAGCATTCTACATCATTGATGCTCATATTTGGGGTTTCCGCGAGGCCTGTGTTGAGCATCATTTACAACAAGGTCAAGGGGTTGCTGGGAGGGCATATTTGTCCCATGACATGTGCTTCTGCAGAAACATTACCCACTTCTGCAAATCTGAATACCCCTTGGTGCATTACGCACTCATGTTTGGGATAACCAGTTGTTTTGCAATCTGTGTAAGAAGCAGTCATACTGAAAATGATGATTATATACTAGAGTTTTTTCTGCCGCCTAGGATCACAGATTTTTATGAACAGAAGACTTTGTTGGGATCCATATTGGGAACAATGAAACAACATTTCCAGAGTCTTAAGATTGCTAGTGGTGTAGAACTTGAGGAGCATAGTTTGGTTGAAATAGCAACAAATGAAAGTGTTCGTTCAAGGTTTGAATCTATTCCAATTATTCAATCTACAAAATCACCATCTGGACCTGACATCTTGCATAAGATAGGGGAAATAGTGCCGCTAGATTCATCAGAACAACAGATAATGATGTACTTTGATGACATAAAAGGCGAAGGGACTCTTCTTGATAATACTGGTGGAAGTGTTGATCAGGTATCTTCCTTGGAAACCAAAAGCACGAAGAAACCCTCCGAGAGAAAACGTGGAAAAACTGAGCAATCAATTAGTCTTGAAGTTTTGCAACAGCATTTCGCTGGGAGTCTTAAAGATGCTGCAAAGAGCCTTGGTGTTTGCCCCACTACAATGAAACGCATTTGTAGGCAGCATGGGATATCTCGTTGGCCATCTAGAAAAATAAACAAGGTTAACCGTTCCCTATCCAAACTAAAGCGAGTAATGGAATCTGTGCAAGGTGCTGAAGGAGCATTTGATTTAAATTCTCTCAGTAATAGCGGACTACCAATTGCTGTTGGCTCCTTTTCTGAGCCTTCAAACAAGTTCAACAAACAAAGCTCACTAAGCACTGGGCCATCAGAAACTCAGGTGAAAGAGAATGACTTGAATGTCTTTCAAGTTCCAGAAATGAACAGACTGGTTGGGGTGGAAGATCAATTAATTGGAGGAATAATTTTAAGTCCAAAGAAAGTGATTCATGACAAAGTTGGGTCCCCTCAGGAATTCAGTAATGGCTCGAACAGGTCTGCAACAAGGAGTGCCTCAAGTGAAGATAGCGCAAATCCTACTTCTCATGGCTCATGCCAAGGTAGTCCCCCAAATGAAACTTCACCTGCAAAAGATACATTTATTGCAGCCAACAATGAGCAATGTGTTGTGGGAGGAGGATCTGTGCAACCGACTAATAAACTGAAATCTCCAACTGCATACCCCATCCCTGACTTTCTGGCGACAGAATTTCAGAAGACATTTGGAGGAATGTTAATTGAGGATACCGGTAGTTCAAAAGACTTAAGAACTCTGTGCCCTTCAGTGGCAGATGCCATTGTGGAGGATCAGGTTCCAGAAGCTTCTGGAACTAATCCTCCATGTTCTGATTTTGCTCCCAATCCCTGCGTTAATACACTTAGCAACAAAATATCACCTTCAGCAGCTAAGAAAGAAATGAACAGTATGACTATAAAAGCAACATACAGAGAAGATATTATAAGGTTTCGGATTTCTTTAACATGCGGTATTCTGGAATTAAAAGAAGAAGTTGCCAAGAGATTGAAACTAGAGTTGGGTAAATATGATATCAAGTATCTGGATGATGATCATGAATGGGTTTTGATAGCCTGTGATGCAGACTTGCAGGAGTGCTTGGACATTTCAAAGGCATCAAGCAGCAAAATAATTAGGCTTTTAGTTCATGACATAGCATCCAACCTTGCAAGCTCCTATGATAGCTCAGGGTAGTGATTAGCTGTAAATAGGGTCAGTTTGTAGTCAGTTAGCCAGATTCTTGTAGTCTTAGGATGACAGAAATAGATTTTGGTTTCAAGTCTGCTCAAATTGTAAGAAATTTACTGCTAGGTTAAAGTAGCAGTTCGACTTTTTAAATCATTGTCTTCAACCAAAAATAAAGCAAGTGTCTCGGATTGCCA 3303 0.4214 MSESEEENPELAPKSKPDPECVMEFDLDLESSWPFDQISYMCNPMSPFLIPPSSEQPSSPILAFSDVDDDRHARVSAAPFSDCKRFFSCNSNSRPEGPTENDDGKKILSPFVALPLLENPDGYCLIKERMTQALRYFKELTEQSVLAQVWAPVRNGNRYVLTTSGQPFVLDSHSNGLHQYRTVSLMYLFSVDGESDGTQGLPGRVFQHKLPEWTPDVQYYSNREYPRRDHAQHFNVHGSLALPVFEPSGQSCVGVLELIMTSQKINYAPDVDKVCKALEAVNLRSSEILDHLNTQICNEGRQNALAEILEILTVVCETHKLPLAQTWVPCRHRSVLAHGGGVKKSCSSFDGSCMGQVCMSTSDVAFYIIDAHIWGFREACVEHHLQQGQGVAGRAYLSHDMCFCRNITHFCKSEYPLVHYALMFGITSCFAICVRSSHTENDDYILEFFLPPRITDFYEQKTLLGSILGTMKQHFQSLKIASGVELEEHSLVEIATNESVRSRFESIPIIQSTKSPSGPDILHKIGEIVPLDSSEQQIMMYFDDIKGEGTLLDNTGGSVDQVSSLETKSTKKPSERKRGKTEQSISLEVLQQHFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKRVMESVQGAEGAFDLNSLSNSGLPIAVGSFSEPSNKFNKQSSLSTGPSETQVKENDLNVFQVPEMNRLVGVEDQLIGGIILSPKKVIHDKVGSPQEFSNGSNRSATRSASSEDSANPTSHGSCQGSPPNETSPAKDTFIAANNEQCVVGGGSVQPTNKLKSPTAYPIPDFLATEFQKTFGGMLIEDTGSSKDLRTLCPSVADAIVEDQVPEASGTNPPCSDFAPNPCVNTLSNKISPSAAKKEMNSMTIKATYREDIIRFRISLTCGILELKEEVAKRLKLELGKYDIKYLDDDHEWVLIACDADLQECLDISKASSSKIIRLLVHDIASNLASSYDSSG 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01993 980 CDD PB1_NLP 887 967 IPR034891 -
Bach8g01993 980 SMART PB1_new 886 968 IPR000270 GO:0005515
Bach8g01993 980 MobiDBLite consensus disorder prediction 1 20 - -
Bach8g01993 980 PANTHER PROTEIN NLP8 54 980 IPR045012 GO:0003700
Bach8g01993 980 MobiDBLite consensus disorder prediction 731 775 - -
Bach8g01993 980 MobiDBLite consensus disorder prediction 734 775 - -
Bach8g01993 980 MobiDBLite consensus disorder prediction 556 583 - -
Bach8g01993 980 Pfam RWP-RK domain 584 632 IPR003035 -
Bach8g01993 980 Pfam PB1 domain 887 967 IPR000270 GO:0005515
Bach8g01993 980 FunFam RWP-RK domain-containing protein 883 967 - -
Bach8g01993 980 ProSiteProfiles RWP-RK domain profile. 571 652 IPR003035 -
Bach8g01993 980 SUPERFAMILY CAD & PB1 domains 882 970 - -
Bach8g01993 980 Gene3D - 883 967 - -
Bach8g01993 980 Gene3D - 195 267 IPR029016 -
Bach8g01993 980 MobiDBLite consensus disorder prediction 569 583 - -
Bach8g01993 980 MobiDBLite consensus disorder prediction 674 694 - -
Bach8g01993 980 ProSiteProfiles PB1 domain profile. 886 968 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01993 Bach-Chr8 16241408 16246022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01993 260 980 NLP Transcription Factor Family AT4G24020 52.038 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Bach8g01993 PB1 5.7e-18 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01993 - - gmx:100786118 1410.59