Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01969 ATGGGATGCAAGGCAATGGATATAGCAAAACCAAAGCACAGGAAGGGCCTATGGTCCCCTGAAGAGGACAATAAGCTCAGAAACTATATCCTTATGCATGGTCATGGTTGCTGGAGCTCTATTCCCATTAAGGCAGGATTGCAGAGGAATGGAAAGAGCTGCAGATTAAGGTGGATTAACTACCTAAGGCCAGGATTGAAGAGAGGGATGTTCAGCAAACAAGAGGAAGAGACAATTCTGACCGTTCACCACATGTTAGGCAACAAGTGGTCTCAGATAGCACAGCATTTGCCAGGAAGGACTGACAATGAGATTAAGAATTACTGGCACTCATATTTGAAAAAGAAAGTAGCCAAAGCTGAGGAAACTGAATCTCGTAAACAAATTCAGCACACTATCTCAAGTTCAGATACATTGAATTCTTCACACTCTTCTCTGGAAAAATCAGCAAGCAGCACTGATCACTTATCTCAGCAGAATTATAACTTCAACAAAGAGGCTAGTCCAAGCCCCTTACCCAAACTGCTATTTGCTGAGTGGCTTTCACTAGATTATGTACATGGTGGGAACTCTGCATATTCAGGTGACTCTTTGGCCCTGAAAAATGGATTTGATCAAAATTCAAATTTCCAGGAAGCTGTAATGCATGGAATGACAGAAAGAATCTATGGCGCCGAGTTTCATACGCATGACAGTACTCTAACTCAAAGTTCAGCAGCTGAGATGTTCAGTTCACAACTTAAGTTTTCAAATCAAATGGCAAATGGGTTCATACATTGTGTCCCTGGGGGTAATTTAAGTAGCAACTTCAGCATGAACAATGATGTAATGTACATATGA 840 0.4143 MGCKAMDIAKPKHRKGLWSPEEDNKLRNYILMHGHGCWSSIPIKAGLQRNGKSCRLRWINYLRPGLKRGMFSKQEEETILTVHHMLGNKWSQIAQHLPGRTDNEIKNYWHSYLKKKVAKAEETESRKQIQHTISSSDTLNSSHSSLEKSASSTDHLSQQNYNFNKEASPSPLPKLLFAEWLSLDYVHGGNSAYSGDSLALKNGFDQNSNFQEAVMHGMTERIYGAEFHTHDSTLTQSSAAEMFSSQLKFSNQMANGFIHCVPGGNLSSNFSMNNDVMYI 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01969 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bach8g01969 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Bach8g01969 279 CDD SANT 71 113 IPR001005 -
Bach8g01969 279 CDD SANT 18 62 IPR001005 -
Bach8g01969 279 PANTHER MYB DOMAIN PROTEIN 55 8 233 - -
Bach8g01969 279 SMART sant 67 115 IPR001005 -
Bach8g01969 279 SMART sant 14 64 IPR001005 -
Bach8g01969 279 Gene3D - 15 67 - -
Bach8g01969 279 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bach8g01969 279 MobiDBLite consensus disorder prediction 129 155 - -
Bach8g01969 279 FunFam MYB transcription factor 12 68 - -
Bach8g01969 279 MobiDBLite consensus disorder prediction 123 155 - -
Bach8g01969 279 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Bach8g01969 279 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Bach8g01969 279 FunFam MYB transcription factor 70 141 - -
Bach8g01969 279 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Bach8g01969 279 Gene3D - 70 142 - -
Bach8g01969 279 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01969 Bach-Chr8 15764860 15766647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01969 4 215 MYB Transcription Factor Family AT5G52260 51.327 1.41e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach8g01969 Myb_DNA-binding 2.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01969 K09422 - gmx:778167 380.563