Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01965 ATGGTCATGGAATCCCAACGATTCCGCTACTTTCTCCTTCTCACATGGACATGGCTTCACCTTATTCTCTTCCATGGCGGCGCTGATGCACAATCAGCTATACAACCAGCCCCTTCTTTTGCTTCCCACCATGGATGGGACCCATCATTTGCTCTCATGGTTGTGGCCCTCACGTGCATCCTGTTGTTCATGGCCTTCTTTTCGGTCTACCTCCGACACTGCACCGGGTACTACAACGATGTGCGCAACCCAAATAGCGGAGCTGCAGATTGGCCCTGTTCCTGCTCTGAGGGTATCAAACCGGAGGTGCTGAAGACGTTTCCGATTCTTGTTTACTCCACCATCAAAGATCTTAAAATTGGGAAAGGAGTGCTTGAGTGTGCGGTGTGTTTGAATGAGTTCAAGGACTCTGACACACTCCGGTTTTTGCCCAAATGCAGCCATGTCTTCCATCCTGATTGTATCGATGCTTGGCTAGCCTCCCATGTCACTTGCCCTGTTTGTCGCGCAAAGCTGAACCCAGACACCGCAGAAGTAGCCATTGAAATTCCCACCGAGTTAAACGCTGGCCAATTGGATGATGAAAGTTCTGATAGGATTGAAGTGGGTGAAATAGAGCAACACCAACACCCGGTGGATTCTACCGTGAACGGTGATCAGAACAGAGCCAATGAAGCTAATGGGAAGCCCAAGTCGAGTAAGTCGGGGAAGAAGCTTGTGAGGTCGAATTCAACGGGTCATTCTTTGGTTGAACCAGGGGAGGATTTGGACAGGTATACGCTGAAGTTGCCGGAGGAGGTGAGTAAGCATATTCTGGTTGATGATCGGCGTTGTGCAAGCTATCATCCCGTGTTTTCTAGAGAAGGGAGTTCCAAGAATTCAAATGGGTTCTGTTGTAGCGACAGTGAAGGGAGCAGTAGAGGTGGTAAGAGAGATAAAGACGGCAACGGTAGTGAGTGCCAAGGTGGGCGGTTGGACCGTTGGGTCTTATTAAGGACTCCGCCATTTGGAGGGAGGAACGTTCGTTGA 1029 0.4995 MVMESQRFRYFLLLTWTWLHLILFHGGADAQSAIQPAPSFASHHGWDPSFALMVVALTCILLFMAFFSVYLRHCTGYYNDVRNPNSGAADWPCSCSEGIKPEVLKTFPILVYSTIKDLKIGKGVLECAVCLNEFKDSDTLRFLPKCSHVFHPDCIDAWLASHVTCPVCRAKLNPDTAEVAIEIPTELNAGQLDDESSDRIEVGEIEQHQHPVDSTVNGDQNRANEANGKPKSSKSGKKLVRSNSTGHSLVEPGEDLDRYTLKLPEEVSKHILVDDRRCASYHPVFSREGSSKNSNGFCCSDSEGSSRGGKRDKDGNGSECQGGRLDRWVLLRTPPFGGRNVR 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01965 342 MobiDBLite consensus disorder prediction 286 302 - -
Bach8g01965 342 MobiDBLite consensus disorder prediction 305 320 - -
Bach8g01965 342 MobiDBLite consensus disorder prediction 206 252 - -
Bach8g01965 342 FunFam E3 ubiquitin-protein ligase ATL6 89 175 - -
Bach8g01965 342 Pfam Ring finger domain 126 169 IPR001841 -
Bach8g01965 342 ProSiteProfiles Zinc finger RING-type profile. 127 169 IPR001841 -
Bach8g01965 342 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 110 177 IPR013083 -
Bach8g01965 342 SMART ring_2 127 168 IPR001841 -
Bach8g01965 342 SUPERFAMILY RING/U-box 126 176 - -
Bach8g01965 342 CDD RING-H2_EL5-like 126 169 - -
Bach8g01965 342 MobiDBLite consensus disorder prediction 285 324 - -
Bach8g01965 342 MobiDBLite consensus disorder prediction 210 230 - -
Bach8g01965 342 PANTHER RING FINGER DOMAIN-CONTAINING 39 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01965 Bach-Chr8 15728368 15729396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01965 19 336 Rapid Response to Elicitors AT3G05200 37.578 1.25e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01965 K10664 - fve:101295180 231.876