Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01944 ATGATTTCTGGTAGGTGTGCAGCTTGCAAGAATCAAAGAAGAAGATGCCCTTCAGATTGCATTTTCTCTCCCTATTTTCCTGCCAATGATCCTCATAGATTCACTTGCATTCATAGAGTATATGGTGGCAGCAATGTCGGAAAAATGCTTCAGCAAATCCCAACCCATGTACGAGCACAAGCAACAGATACTTTATATTTTGAAGCACAATGTCGGATTCAAGACCCTGTTTATGGATGTGCTGGGATTATATATCAGCTGCATCAACAAATCCAAAATGCAGAAAGTGAGCTAGTAGAAATCCAAGCTCAGATTGCTTTCCACAAGTCCCAAATACCACTGGTTGAAGCTGAATCAAACTTCAGTCTCTTGCCAGCACAAAGCATCATGGGGCAGTTTCAGCAGGAGGGTCCTTGA 417 0.4245 MISGRCAACKNQRRRCPSDCIFSPYFPANDPHRFTCIHRVYGGSNVGKMLQQIPTHVRAQATDTLYFEAQCRIQDPVYGCAGIIYQLHQQIQNAESELVEIQAQIAFHKSQIPLVEAESNFSLLPAQSIMGQFQQEGP 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01944 138 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Bach8g01944 138 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 113 - -
Bach8g01944 138 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Bach8g01944 138 Coils Coil 84 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01944 Bach-Chr8 15279453 15280342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01944 1 112 AS2 family AT3G26660 58.036 1.51e-49 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bach8g01944 LOB 7.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01944 - - gmx:100790640 201.06