Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01942 ATGGATAATTACTCTCCCAACGACAACGTGCCTAAAAGCGACACTTCTCTTCCTCATCCTATACAAATTCCCCATGACCTATTTACTACTCCAGCTGCATTTGAAGATTCTTCTTCTGCATCTCCATCTCCAACTCCAAGACTCGTTATATCTCCATCTGGGTCGTCGGGTCAACACGGCACCCAACGACACCTAGAATACCGGGGAATCCGGCGCCGGAGCGGGAAATGGGTGTCCGAGATACGAGAGCCACGTAAAAAGACGCGCATATGGCTGGGAACTTACCCCACCCCGGAAATGGCTGCTGCGGCATATGATGCTGCTGCTCTTGCATTGAAGGGGCTAAACGCGCCCCTCAACTTCCCCGATTCTCTTGTTTCATATCCGGTTCCGGCGTCATTGTCTGCAACTGATATTCGAAGCGCTGCTGCTGCCGCTGCTGAGGCTAGGCTTGTGAGGCAGGAACAAGGTCCCCCACCTGAGAATCCTCAGAGCTCATCAAGTAGCTCCCAATACCAAACTATTTCATCGGGGAAGAATGAGGAATTCGTTGATGAGGATGAGCTCTTGAATATGCCCAGTCTGCTGGATGATATGGCCAGGGGAATGCAGGTAAGCCCACCAAGGATGATTAGATCGCCATCTTCAGATGATTCTCCGGGAAATTCCGATGGAGATACTCTTTGGAGTTATTCTTGA 699 0.5064 MDNYSPNDNVPKSDTSLPHPIQIPHDLFTTPAAFEDSSSASPSPTPRLVISPSGSSGQHGTQRHLEYRGIRRRSGKWVSEIREPRKKTRIWLGTYPTPEMAAAAYDAAALALKGLNAPLNFPDSLVSYPVPASLSATDIRSAAAAAAEARLVRQEQGPPPENPQSSSSSSQYQTISSGKNEEFVDEDELLNMPSLLDDMARGMQVSPPRMIRSPSSDDSPGNSDGDTLWSYS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01942 232 MobiDBLite consensus disorder prediction 209 232 - -
Bach8g01942 232 SUPERFAMILY DNA-binding domain 67 124 IPR016177 GO:0003677
Bach8g01942 232 MobiDBLite consensus disorder prediction 158 179 - -
Bach8g01942 232 Gene3D AP2/ERF domain 66 123 IPR036955 GO:0003700|GO:0006355
Bach8g01942 232 MobiDBLite consensus disorder prediction 32 62 - -
Bach8g01942 232 FunFam Ethylene-responsive transcription factor 2 66 123 - -
Bach8g01942 232 Pfam AP2 domain 67 114 IPR001471 GO:0003700|GO:0006355
Bach8g01942 232 CDD AP2 67 124 IPR001471 GO:0003700|GO:0006355
Bach8g01942 232 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 46 203 - -
Bach8g01942 232 SMART rav1_2 66 128 IPR001471 GO:0003700|GO:0006355
Bach8g01942 232 MobiDBLite consensus disorder prediction 1 65 - -
Bach8g01942 232 MobiDBLite consensus disorder prediction 1 16 - -
Bach8g01942 232 ProSiteProfiles AP2/ERF domain profile. 66 122 IPR001471 GO:0003700|GO:0006355
Bach8g01942 232 MobiDBLite consensus disorder prediction 147 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01942 Bach-Chr8 15252679 15253377 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01942 53 231 AP2-EREBP Transcription Factor Family AT5G52020 54.144 1.86e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach8g01942 AP2 2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01942 - - pcin:129293795 237.269