Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01940 ATGTCATCATCGGTGTCGGACAGTTCCGTTGGCGGTCATGGGGTGACATTATCCGACGAGGAGTTGCTGTTGGCTTCGAGGAATCCGAAGAAGCGTGCGGGGAGGAAGAAGTTCAGGGAGACTCGGCACCCGGTGTATAGGGGTGTGAGGAGGAGGAACTCCGACAAGTGGGTGTGTGAAGTGCGCGAGCCTAATAAGAAAACTAGGATTTGGCTCGGCACCTTTCCGACAGCGGAAATGGCGGCGCGGGCACATGACGTGGCGGCGATTGCGCTACGTGGTCGGTCTGCTTGTCTAAATTTTGCGGACTCAGCTCGGCGGTTGCCGGTTCCGGCGTCGATGGAAGCGAAGGATATTCAGAAGGCGGCAGCAGAAGCGGCGGAGGCGTTCCGGCCCGGGGCAGAGTCGGATACTGATGATGGAACGCAGGGAAATGCGGCGATAAGTACGGTGGCGGAGGGAGAGGGAGAGGAAAATATGTTCTATATGGATGATGAAGAGATGGTGCCGGAATTGCTGAGGGAAACGGCGCTCATGTCCCCACAACATTGCTTGGGGGATGAGTGGTGGCATGGAACTGACGTGGATATTGGTGATGCTGAGGTGTCATTATGGAGTTATTCAATTTAA 630 0.5571 MSSSVSDSSVGGHGVTLSDEELLLASRNPKKRAGRKKFRETRHPVYRGVRRRNSDKWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSARRLPVPASMEAKDIQKAAAEAAEAFRPGAESDTDDGTQGNAAISTVAEGEGEENMFYMDDEEMVPELLRETALMSPQHCLGDEWWHGTDVDIGDAEVSLWSYSI 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01940 209 CDD AP2 46 104 IPR001471 GO:0003700|GO:0006355
Bach8g01940 209 Gene3D AP2/ERF domain 45 103 IPR036955 GO:0003700|GO:0006355
Bach8g01940 209 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Bach8g01940 209 SUPERFAMILY DNA-binding domain 45 104 IPR016177 GO:0003677
Bach8g01940 209 Pfam AP2 domain 44 94 IPR001471 GO:0003700|GO:0006355
Bach8g01940 209 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Bach8g01940 209 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Bach8g01940 209 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Bach8g01940 209 FunFam Ethylene-responsive transcription factor 2 44 103 - -
Bach8g01940 209 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 7 207 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01940 Bach-Chr8 15204789 15205418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01940 1 207 AP2-EREBP Transcription Factor Family AT4G25480 60.094 3.49e-68 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach8g01940 AP2 7.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01940 - - gmx:100101894 265.003