Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01917 ATGAATTCTTCATACCCTGGTGATGAGTTAACCTTTCCGATACGATCTCATAACCTTTGTCCCCACCCAATCCAAAAAATCCCAGAAGATCAAATCCTGCATATTGATCCTCTTACAGAATTCAGTTGTCTTGGTAACAATAGCCATGTACGGAAGGGAAAGATGGGAAAGCAATTACCTGCTTGTGAAAAAGACGACCTTAAAATAATAAAGGATGAAAACAAGACGTGGATGCGCAAGGAAACAGAAAAGCAAAGAAGGCGAGAAATGGCCACACTTTGTGCTTCCCTCAGATCTATATTGCCTCTTGAGTACATAAAGGGAAAGCGCTCAACTTCTGATCACACGTATGAGGCTGTGAATTATATCAAACACCTAAAGAATAAGGTGAAGCAGTTGGAAGCCAAGAGAGATAAGATAAGGAAGTTATCTAATTTGAGTTTTGTCAGCTCTGGAAGTGAAAGCTCAACTACCCATCTTCCTACCTATGTTATTGTTCACCCTTGTTTGGATGGCGTCCAGATAATGTGCAGTTATAGCTTGAAGCAGCATGCATTTCCTCTATCAACTTTACTTGATATACTGCAAAGAGAAGGTCTTAATGTGGTCAGCTGTACTTCCACCAAAACAAATGATCAAAGGTTCATACACACTATCCGATCAGAGGTACCATATATATCAGCGTTTATAACTGATTATTCATTAATTAAAATGTTACTCTCGTTCTAA 729 0.3896 MNSSYPGDELTFPIRSHNLCPHPIQKIPEDQILHIDPLTEFSCLGNNSHVRKGKMGKQLPACEKDDLKIIKDENKTWMRKETEKQRRREMATLCASLRSILPLEYIKGKRSTSDHTYEAVNYIKHLKNKVKQLEAKRDKIRKLSNLSFVSSGSESSTTHLPTYVIVHPCLDGVQIMCSYSLKQHAFPLSTLLDILQREGLNVVSCTSTKTNDQRFIHTIRSEVPYISAFITDYSLIKMLLSF 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01917 242 CDD bHLH_AtORG2_like 78 145 - -
Bach8g01917 242 Gene3D - 68 148 IPR036638 GO:0046983
Bach8g01917 242 FunFam Transcription factor bHLH126 67 154 - -
Bach8g01917 242 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 73 222 - -
Bach8g01917 242 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 73 141 IPR036638 GO:0046983
Bach8g01917 242 Pfam Helix-loop-helix DNA-binding domain 79 127 IPR011598 GO:0046983
Bach8g01917 242 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 74 126 IPR011598 GO:0046983
Bach8g01917 242 Coils Coil 123 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01917 Bach-Chr8 14752827 14753945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01917 80 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25400 43.558 2.05e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach8g01917 HLH 1.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01917 - - gmx:100803786 224.942