Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01914 CACGATTATCTCTGCCAAGAACATCATGCCTTCTCTTCCCCTCTCTGATGCCATTTTTTGTGAGAGCCAAAAAGATAAGGAAAAGGAGAACAAGAAGAAGATGAAGAACCAGACTCTAGCTTCAGAACCCGAAGGATCGGTTGGCAAGAAGAGTAAGAAAATTTCCAAGCTTAGGAGCACACCGAAAGCGTCTGATTCTGAGGATGAGGAATTTTCGGACAAGAAGGTGAAGAAGAAGAAAAAGGAGAGCAAAAAGCGTAAGGCTTTGGAAATTGAGAATATGATGGATGGAGACGAAAACAAGAGTGAGACTAGCTCCGAGCTTGTTGAGCCGGAAGCCTCGAAATCTATGACTGAAGAGAAGAGGAAGAAGAAAAAGGCGAAGCTGGAGGAGCTTGAAGTGGACGAAGAAGAGGTTGAGAAGAAGGATCCAAATGCAATTGCGAATTTCAGGATATCGGATACATTGAGAGAAAAGTTGAAGGAGAAGGGAATTGAATCGCTTTTCCCCATTCAGGCCATGACTTTCGATACCATTCTCGACGGGTCTGATTTGGTTGGTCGGGCTCGCACTGGTCAGGGTAAAACTTTGGCCTTTGTGTTGCCCATTTTACAATCTTTGACAGATGGTCTGGCAAAAGCATCAAGAAAAACTGGATATGGAAGAGCTCCAAGCGTTCTTGTGCTTTTACCCACCAGGGAATTGGCTAATCAGGTATTTGCTGATTTTGATGTTTACGGAGGAGCACTTGGATTGAGTTCTTGCTGTTTATATGGTGGAGCCTCATATCAAGCTCAAGATATTAAGCTCAAGAGAGGAGTTGATATTGTTGTTGGAACACCAGGCCGCATAAAGGATCATATAGAGAGGGGAAATATTGATCTGAGCCAACTAAGATTCCGTGTCCTTGATGAGGCCGATGAGATGCTGAAGATGGGCTTTGTTGAAGATGTTGAACTCATACTGGGTAAAGTAGGGGATGCTAGAAAGGTTCAAACACTCCTTTTCAGTGCTACTTTGCCAGATTGGGTTAAACATCTTGCTGCAAAATTTCTAAAACCAGATAAGAAAATTGCTGACCTTGTTGGGAATGAGAAAATGAAGGCCAGCACCAATGTTAGGCATATTGTTCTACCATGTTCTGGTTCTGCCAGGTCCCAGCTTATACCTGATATTATTCGTTGTTACAGCAGTGGAGGTCGGACAATTATATTCACCGAGACAAAGGAGTCTGCTTCGGAGCTTGCAGGCTTATTGCCTGGAGCACGGCCTCTGCATGGTGACATACAGCAGTCACAACGAGAGGTTACTTTGTCTGGCTTCAGGTCTGGGAAATTCATGAAATTGGTGGCCACAAATGTGGCAGCCCGGGGTTTGGACATTAATGATGTTCAGTTAATTATTCAGTGTGAACCTCCACGTGATGTAGAAGCTTATATCCATCGATCTGGGCGCACAGGAAGAGCAGGGAATACTGGTGTTGCTGTTATGCTTTATGATCCGAGAAGGTCAAATATATCAAAAATAGAAAGGGAATCAGGTGTGAAATTTGAGCATATATCTGCTCCCCAATCAGCTGATATTGCCAAAGCTCTTGGTGCGGATGCTACTGAAATGATAACACAAGTGTCTGATAGTGTGATTCCTGCATTCAAGACTGCTGCTGAGGAGCTTCTGAACAACTCTGGTTTATCATCTGTTGAGTTACTTGCCAAAGCTCTTGCTAAGGCTGTTGGTTATACTGAGATAAAGAAAAGATCACTTCTGACTTCCATGGAGAACCATGTCACATTGCTTCTAGAGATCGGAAGGCCCATCTACACCCCATCTTTTGCATATGGAGTCTTGAGGAGATTTTTGCCTGAGGATAAAGTTGAGGCAGTGAAAGGGTTTACTCTCACTGCTGATGGAAACGGTGCTGTATTTGATGTTGCAGCTGAAGATTTAGACACATATCTCGCTGGCCAGGAAAATGCAGCTAATGTCAGCTTAGAGGTGTTGAATGCATTGCCGCGGTTGCAAGAAAGAGACCAATCAAAAGGGGGCAGATTTGGTGGTCGTGCTGGTTTTGGTGATAGAAGTGGCGGTGGTAACAGATTTGGTGGAAGAGGTGGTGGCAGGAATGGCGGATTTTCGAACCAGAGGAATAGTAGGTTTTCCAATGGAGGTGGGAGAGGTCGTGATAACAAGGGGGCAAAGAGATGGTAG 2209 0.4445 MKNQTLASEPEGSVGKKSKKISKLRSTPKASDSEDEEFSDKKVKKKKKESKKRKALEIENMMDGDENKSETSSELVEPEASKSMTEEKRKKKKAKLEELEVDEEEVEKKDPNAIANFRISDTLREKLKEKGIESLFPIQAMTFDTILDGSDLVGRARTGQGKTLAFVLPILQSLTDGLAKASRKTGYGRAPSVLVLLPTRELANQVFADFDVYGGALGLSSCCLYGGASYQAQDIKLKRGVDIVVGTPGRIKDHIERGNIDLSQLRFRVLDEADEMLKMGFVEDVELILGKVGDARKVQTLLFSATLPDWVKHLAAKFLKPDKKIADLVGNEKMKASTNVRHIVLPCSGSARSQLIPDIIRCYSSGGRTIIFTETKESASELAGLLPGARPLHGDIQQSQREVTLSGFRSGKFMKLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRRSNISKIERESGVKFEHISAPQSADIAKALGADATEMITQVSDSVIPAFKTAAEELLNNSGLSSVELLAKALAKAVGYTEIKKRSLLTSMENHVTLLLEIGRPIYTPSFAYGVLRRFLPEDKVEAVKGFTLTADGNGAVFDVAAEDLDTYLAGQENAANVSLEVLNALPRLQERDQSKGGRFGGRAGFGDRSGGGNRFGGRGGGRNGGFSNQRNSRFSNGGGRGRDNKGAKRW 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01914 702 MobiDBLite consensus disorder prediction 25 44 - -
Bach8g01914 702 Pfam GUCT (NUC152) domain 546 641 IPR012562 GO:0003723|GO:0004386|GO:0005524
Bach8g01914 702 Gene3D - 62 326 IPR027417 -
Bach8g01914 702 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 143 325 IPR014001 -
Bach8g01914 702 MobiDBLite consensus disorder prediction 52 99 - -
Bach8g01914 702 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 354 496 IPR001650 -
Bach8g01914 702 SMART ultradead3 131 343 IPR014001 -
Bach8g01914 702 MobiDBLite consensus disorder prediction 642 702 - -
Bach8g01914 702 CDD DEADc 123 320 - -
Bach8g01914 702 Gene3D - 564 635 - -
Bach8g01914 702 SUPERFAMILY RNA-binding domain, RBD 550 633 IPR035979 GO:0003676
Bach8g01914 702 CDD GUCT_RH7_like 553 638 - -
Bach8g01914 702 FunFam DEAD-box ATP-dependent RNA helicase 7 563 635 - -
Bach8g01914 702 CDD SF2_C_DEAD 340 466 - -
Bach8g01914 702 Pfam Helicase conserved C-terminal domain 359 457 IPR001650 -
Bach8g01914 702 Coils Coil 82 109 - -
Bach8g01914 702 SMART helicmild6 380 457 IPR001650 -
Bach8g01914 702 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 469 IPR027417 -
Bach8g01914 702 MobiDBLite consensus disorder prediction 676 690 - -
Bach8g01914 702 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 269 277 IPR000629 -
Bach8g01914 702 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 59 535 - -
Bach8g01914 702 MobiDBLite consensus disorder prediction 1 99 - -
Bach8g01914 702 Pfam DEAD/DEAH box helicase 136 313 IPR011545 GO:0003676|GO:0005524
Bach8g01914 702 Gene3D - 339 563 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01914 Bach-Chr8 14641611 14647169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01914 149 463 Eukaryotic Initiation Factors Gene Family AT1G72730 31.975 2.12e-39 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01914 K16911 - qsa:O6P43_005503 959.518